C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002WD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032272-ENSDARG00000026444 CGP 7955 24:22581877-22597354
GeneTranscriptPositionBiotype
ENSDARG00000026444 (apoob)
apolipoprotein O, b 		ENSDART00000032963 (apoob-001) 22586178-22597354 protein_coding
ENSDARG00000032272 (sat1b)
spermidine/spermine N1-acetyl transferase 1b 		ENSDART00000042495 (sat1b-001) 22581877-22586792 protein_coding
CIL_0002WD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130066-ENSG00000184831 CGP 9606 X:23783158-23907934
GeneTranscriptPositionBiotype
ENSG00000130066 (SAT1)
spermidine/spermine N1-acetyltransferase 1 		ENST00000379251 (SAT1-004) 23783173-23784213 protein_coding
ENST00000379253 (SAT1-003) 23783173-23784411 protein_coding
ENST00000379254 (SAT1-005) 23783173-23786113 protein_coding
ENST00000379270 (SAT1-001) 23783173-23786226 protein_coding
ENST00000462639 (SAT1-007) 23785260-23786210 processed_transcript
ENST00000463236 (SAT1-009) 23783337-23786109 processed_transcript
ENST00000474223 (SAT1-006) 23784753-23786000 processed_transcript
ENST00000487713 (SAT1-008) 23783508-23784029 processed_transcript
ENST00000489394 (SAT1-002) 23783197-23786210 processed_transcript
ENST00000612412 (SAT1-201) 23783158-23786208 protein_coding
ENSG00000165182 (CXorf58)
chromosome X open reading frame 58 		ENST00000379211 (CXorf58-001) 23907801-23939507 protein_coding
ENST00000435707 (CXorf58-002) 23910383-23916501 protein_coding
ENSG00000184831 (APOO)
apolipoprotein O 		ENST00000379226 (APOO-002) 23833353-23907934 protein_coding
ENST00000439528 (APOO-001) 23833363-23880901 protein_coding
ENST00000476598 (APOO-004) 23833360-23840405 processed_transcript
ENST00000490078 (APOO-003) 23833367-23907903 nonsense_mediated_decay
ENSG00000238103 (RPL9P7)
ribosomal protein L9 pseudogene 7 		ENST00000330965 (RPL9P7-001) 23836742-23837321 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WD_0001ENSDARG00000026444ENSDART00000032963ENSDARG00000032272ENSDART00000042495CIL_0002WD_0002ENSG00000130066ENST00000379251ENST00000379253ENST00000379254ENST00000379270ENST00000462639ENST00000463236ENST00000474223ENST00000487713ENST00000489394ENST00000612412ENSG00000165182ENST00000379211ENST00000435707ENSG00000184831ENST00000379226ENST00000439528ENST00000476598ENST00000490078ENSG00000238103ENST00000330965
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WD_0001ENSDARG00000026444ENSDART00000032963ENSDARG00000032272ENSDART00000042495CIL_0002WD_0002ENSG00000130066ENST00000379251ENST00000379253ENST00000379254ENST00000379270ENST00000463236ENST00000474223ENST00000489394ENSG00000165182ENST00000379211ENSG00000184831ENST00000379226ENST00000439528ENST00000476598ENST00000490078ENSG00000238103ENST00000330965
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026444 ENSDART00000032963 N/A N/A N/A 25.132±6.91 N/A N/A 3.645±1.42 3.254±0.87 N/A N/A 2.033±0.00 N/A N/A N/A
ENSDARG00000032272 ENSDART00000042495 N/A N/A N/A N/A N/A N/A 5.999±0.59 5.891±0.00 1.186±0.00 N/A 2.436±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130066 ENST00000379251 N/A N/A N/A N/A N/A N/A 4.142±0.00 N/A 7.308±0.00 31.485±0.00 N/A N/A N/A N/A
ENST00000379253 N/A N/A 25.774±0.00 16.135±0.00 N/A 27.257±0.00 4.946±0.00 40.802±0.00 N/A N/A N/A 193.091±146.35 N/A 26.450±0.00
ENST00000379254 N/A N/A N/A N/A N/A N/A N/A N/A N/A 332.810±0.00 N/A N/A N/A N/A
ENST00000379270 159.574±0.00 64.659±0.00 31.794±0.00 48.620±13.69 63.670±10.04 67.290±23.98 15.339±11.16 109.660±16.35 53.358±35.91 523.408±471.35 7.640±3.88 295.537±278.91 397.099±81.60 66.935±12.30
ENST00000462639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463236 41.096±0.00 22.570±0.00 N/A 32.268±0.00 22.337±0.00 37.737±0.00 N/A 41.367±0.00 N/A N/A 3.951±0.00 N/A N/A 19.116±0.00
ENST00000474223 N/A 25.389±0.00 N/A N/A N/A N/A 14.260±0.00 28.524±0.00 25.927±0.00 N/A N/A 101.832±0.00 N/A N/A
ENST00000487713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489394 N/A N/A N/A N/A N/A N/A 2.334±0.00 N/A N/A N/A N/A 29.693±18.53 N/A N/A
ENST00000612412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165182 ENST00000379211 N/A N/A 0.336±0.00 N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A 2.472±1.79
ENST00000435707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184831 ENST00000379226 N/A 0.788±0.00 N/A 5.615±1.19 1.749±0.00 2.125±1.72 8.164±5.94 6.632±5.90 1.029±0.49 2.363±1.85 2.628±0.00 6.249±1.75 1.793±0.36 11.504±0.00
ENST00000439528 1.152±0.00 2.372±0.00 N/A 16.525±6.71 3.079±2.58 2.538±0.78 7.170±3.94 5.777±3.26 2.516±0.00 1.390±0.00 3.851±0.00 9.721±3.11 7.397±0.41 7.544±4.07
ENST00000476598 N/A N/A N/A N/A N/A N/A N/A N/A 2.068±0.07 N/A N/A N/A N/A N/A
ENST00000490078 N/A 1.661±0.00 N/A 4.809±0.00 N/A N/A N/A N/A N/A 2.159±0.00 1.276±0.00 N/A N/A N/A
ENSG00000238103 ENST00000330965 0.023±0.00 0.190±0.00 N/A 0.049±0.00 0.396±0.00 0.022±0.00 N/A 0.167±0.00 N/A 0.218±0.00 0.042±0.00 0.134±0.13 0.082±0.00 N/A

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