C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 protein transport domain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513799 TMED9-004 ENSG00000184840 9606 + 5:177592488-177595577 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyTestisENST00000513799
Transcript ID Adipose Adrenal Breast Colon Kidney Testis
ENST00000513799 23.676±0.00 25.098±0.00 24.368±0.00 16.002±0.00 30.533±0.00 19.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0002YQ CIL_0002YQ_0001 CGP 5:177519788-177596124
CIL_000387 CIL_000387_0001 CGP 5:177592158-177610347

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109905 Tmed9-201 protein_coding Mus_musculus 0 706
ENSMUST00000119445 Gm13444-001 processed_pseudogene Mus_musculus 0 507
ENSDART00000129801 tmed4-002 processed_transcript Danio_rerio 0 300
ENSDART00000144609 tmed4-001 protein_coding Danio_rerio 0 300

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