C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000358_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106341-ENSG00000154678 CGP 9606 7:31686715-32299329
GeneTranscriptPositionBiotype
ENSG00000106341 (PPP1R17)
protein phosphatase 1, regulatory subunit 17 		ENST00000342032 (PPP1R17-001) 31686715-31708455 protein_coding
ENST00000409146 (PPP1R17-002) 31687215-31707409 protein_coding
ENST00000498609 (PPP1R17-003) 31695963-31707596 processed_transcript
ENSG00000154678 (PDE1C)
phosphodiesterase 1C, calmodulin-dependent 70kDa 		ENST00000321453 (PDE1C-002) 31753076-32071436 protein_coding
ENST00000396182 (PDE1C-007) 31790200-32070862 protein_coding
ENST00000396184 (PDE1C-003) 31783504-32071408 protein_coding
ENST00000396189 (PDE1C-004) 31880849-32071433 protein_coding
ENST00000396191 (PDE1C-006) 31753018-32070849 protein_coding
ENST00000396193 (PDE1C-001) 31751179-32299329 protein_coding
ENST00000464881 (PDE1C-011) 31873332-32078010 processed_transcript
ENST00000478736 (PDE1C-009) 31847864-31850902 retained_intron
ENST00000479980 (PDE1C-010) 31790171-31820919 processed_transcript
ENST00000482681 (PDE1C-008) 31865017-31879284 retained_intron
ENST00000495221 (PDE1C-005) 32070484-32071371 processed_transcript
ENSG00000236460 (SNX2P2)
sorting nexin 2 pseudogene 2 		ENST00000424553 (SNX2P2-001) 31941261-31941583 processed_pseudogene
CIL_000358_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002930-ENSMUSG00000004347 CGP 10090 6:56017515-56369634
GeneTranscriptPositionBiotype
ENSMUSG00000002930 (Ppp1r17)
protein phosphatase 1, regulatory subunit 17 		ENSMUST00000052827 (Ppp1r17-201) 56017515-56032688 protein_coding
ENSMUSG00000004347 (Pde1c)
phosphodiesterase 1C 		ENSMUST00000044505 (Pde1c-201) 56069821-56362392 protein_coding
ENSMUST00000114327 (Pde1c-202) 56079988-56362519 protein_coding
ENSMUST00000164037 (Pde1c-203) 56100446-56362392 protein_coding
ENSMUST00000164752 (Pde1c-204) 56100446-56362810 protein_coding
ENSMUST00000166102 (Pde1c-205) 56100446-56362392 protein_coding
ENSMUST00000166890 (Pde1c-206) 56100446-56369634 protein_coding
ENSMUST00000168944 (Pde1c-207) 56079988-56369634 protein_coding
ENSMUST00000170774 (Pde1c-208) 56079988-56369634 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000358_0001ENSG00000106341ENST00000342032ENST00000409146ENST00000498609ENSG00000154678ENST00000321453ENST00000396182ENST00000396184ENST00000396189ENST00000396191ENST00000396193ENST00000464881ENST00000478736ENST00000479980ENST00000482681ENST00000495221ENSG00000236460ENST00000424553CIL_000358_0002ENSMUSG00000002930ENSMUST00000052827ENSMUSG00000004347ENSMUST00000044505ENSMUST00000114327ENSMUST00000164037ENSMUST00000164752ENSMUST00000166102ENSMUST00000166890ENSMUST00000168944ENSMUST00000170774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000358_0001ENSG00000106341ENST00000342032ENST00000409146ENST00000498609ENSG00000154678ENST00000321453ENST00000396182ENST00000396184ENST00000396191ENST00000396193ENST00000479980ENSG00000236460ENST00000424553CIL_000358_0002ENSMUSG00000002930ENSMUST00000052827ENSMUSG00000004347ENSMUST00000044505ENSMUST00000114327ENSMUST00000164037ENSMUST00000164752ENSMUST00000166102ENSMUST00000166890ENSMUST00000168944ENSMUST00000170774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106341 ENST00000342032 0.013±0.00 0.053±0.00 N/A 0.604±0.22 0.010±0.00 0.029±0.00 0.125±0.00 N/A N/A N/A N/A 0.080±0.07 N/A 0.202±0.02
ENST00000409146 0.136±0.00 0.077±0.00 N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A 0.195±0.00
ENST00000498609 N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A N/A 0.228±0.03
ENSG00000154678 ENST00000321453 N/A N/A 0.495±0.00 N/A N/A 0.575±0.00 N/A N/A N/A N/A N/A 0.186±0.00 N/A 0.464±0.00
ENST00000396182 N/A N/A 1.041±0.00 3.255±0.00 N/A N/A 12.455±0.00 N/A 4.810±0.00 2.010±0.00 0.019±0.00 0.790±0.00 N/A 2.352±0.82
ENST00000396184 0.110±0.00 0.425±0.00 N/A 0.831±0.00 0.241±0.00 0.353±0.00 6.711±0.00 0.005±0.00 N/A N/A N/A 0.269±0.00 0.129±0.00 0.453±0.00
ENST00000396189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396191 N/A N/A N/A N/A 1.351±0.00 N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A
ENST00000396193 N/A N/A 0.412±0.00 4.699±0.00 0.356±0.04 0.459±0.00 N/A 0.431±0.00 1.269±0.00 N/A 0.126±0.00 N/A 0.056±0.00 0.672±0.40
ENST00000464881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479980 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A
ENST00000482681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236460 ENST00000424553 N/A N/A 0.974±0.00 N/A N/A N/A N/A N/A 0.918±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002930 ENSMUST00000052827 N/A 0.696±0.30 0.020±0.01 0.776±0.46 N/A N/A 0.052±0.01 N/A 0.007±0.00 N/A N/A 0.014±0.00 N/A 0.120±0.09
ENSMUSG00000004347 ENSMUST00000044505 0.015±0.00 0.024±0.00 N/A 0.842±0.06 0.067±0.02 0.181±0.10 1.924±0.42 0.187±0.00 0.037±0.02 0.065±0.01 0.058±0.02 0.064±0.04 0.031±0.01 N/A
ENSMUST00000114327 N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A
ENSMUST00000164037 N/A N/A N/A N/A 0.034±0.00 0.046±0.00 N/A 0.058±0.01 N/A 0.028±0.00 N/A N/A N/A N/A
ENSMUST00000164752 N/A N/A N/A N/A 0.027±0.00 0.083±0.00 N/A 0.149±0.00 N/A N/A 0.022±0.00 0.040±0.00 0.009±0.00 N/A
ENSMUST00000166102 N/A N/A N/A 0.491±0.00 0.039±0.00 0.036±0.01 1.465±0.94 0.133±0.09 0.030±0.00 0.032±0.00 N/A N/A N/A N/A
ENSMUST00000166890 0.022±0.01 N/A 0.003±0.00 0.693±0.05 0.056±0.03 0.103±0.02 2.229±0.97 0.142±0.00 0.050±0.04 0.045±0.01 0.039±0.01 0.051±0.02 0.013±0.01 4.794±2.26
ENSMUST00000168944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A
ENSMUST00000170774 0.012±0.00 0.062±0.03 0.006±0.00 N/A 0.040±0.00 0.080±0.04 N/A N/A N/A 0.050±0.00 N/A 0.044±0.01 0.053±0.00 N/A

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