C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, alpha X (complement component 3 receptor 4 subunit)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000268296 ITGAX-001 ENSG00000140678 9606 + 16:31355134-31382997 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000268296
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000268296 1.888±0.00 1.585±0.00 0.190±0.06 2.316±1.11 0.560±0.00 0.288±0.00 0.640±0.00 4.949±4.03 1.410±0.95 1.124±0.15 0.217±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035O CIL_00035O_0001 CGP 16:31259990-31382997
CIL_00035N CIL_00035N_0001 CGP 16:31355134-31426505

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0007155 TAS cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007596 TAS blood coagulation
GO:0008305 IEA integrin complex
GO:0009887 TAS organ morphogenesis
GO:0009986 IDA cell surface
GO:0016020 IDA membrane
GO:0030198 TAS extracellular matrix organization
GO:0034113 IMP heterotypic cell-cell adhesion
GO:0046872 IEA metal ion binding
GO:0050900 TAS leukocyte migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033053 Itgax-201 protein_coding Mus_musculus 0 1421

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