C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha X
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033053 Itgax-201 ENSMUSG00000030789 10090 + 7:128129547-128150656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033053
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033053 1.830±0.87 0.549±0.19 0.884±0.10 0.044±0.02 2.469±0.64 1.216±0.52 0.121±0.03 0.380±0.14 0.107±0.08 10.888±0.70 0.077±0.08 0.803±0.33 0.166±0.22 0.078±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035O CIL_00035O_0002 CGP 7:128062640-128150656
CIL_00035N CIL_00035N_0002 CGP 7:128129547-128223816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0009897 IDA external side of plasma membrane
GO:0046872 IEA metal ion binding
GO:0051607 IDA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268296 ITGAX-001 protein_coding Homo_sapiens 0 1421
ENST00000287497 ITGAM-002 protein_coding Homo_sapiens 0 477
ENST00000389202 ITGAD-001 protein_coding Homo_sapiens 0 713
ENST00000544665 ITGAM-001 protein_coding Homo_sapiens 0 470
ENST00000562522 ITGAX-004 protein_coding Homo_sapiens 0 1421
ENST00000571644 ITGAX-005 retained_intron Homo_sapiens 0 756

Loading