C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000390_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151948-ENSG00000151952 CGP 9606 12:128853427-129903666
GeneTranscriptPositionBiotype
ENSG00000151948 (GLT1D1)
glycosyltransferase 1 domain containing 1 		ENST00000281703 (GLT1D1-001) 128853536-128984968 protein_coding
ENST00000413816 (GLT1D1-006) 128853603-128984300 nonsense_mediated_decay
ENST00000441390 (GLT1D1-003) 128853427-128984956 nonsense_mediated_decay
ENST00000442111 (GLT1D1-002) 128853494-128984956 protein_coding
ENST00000537468 (GLT1D1-005) 128864136-128983739 protein_coding
ENST00000539044 (GLT1D1-007) 128853582-128930461 nonsense_mediated_decay
ENSG00000151952 (TMEM132D)
transmembrane protein 132D 		ENST00000389441 (TMEM132D-002) 129071725-129086000 protein_coding
ENST00000422113 (TMEM132D-001) 129071726-129903666 protein_coding
ENST00000619366 (TMEM132D-201) 129071726-129700721 protein_coding
ENSG00000237578 (RP11-174M13.1)
 ENST00000417598 (RP11-174M13.1-001) 129747388-129747892 processed_pseudogene
ENSG00000251536 (RP11-572C21.1)
 ENST00000502221 (RP11-572C21.1-001) 129852208-129854944 lincRNA
ENSG00000255838 (RP11-753B7.2)
 ENST00000539058 (RP11-753B7.2-001) 128944274-128945203 unprocessed_pseudogene
ENSG00000256085 (RP11-337L12.1)
 ENST00000539362 (RP11-337L12.1-001) 129521303-129522763 lincRNA
ENSG00000256137 (RP11-174M13.2)
 ENST00000544036 (RP11-174M13.2-001) 129681427-129698227 lincRNA
ENSG00000256581 (NLRP9P)
NLR family, pyrin domain containing 9 pseudogene 		ENST00000540920 (NLRP9P-001) 129013336-129016663 unprocessed_pseudogene
ENSG00000256699 (RP11-669N7.3)
 ENST00000542578 (RP11-669N7.3-001) 129208601-129212662 lincRNA
ENSG00000280051 (RP11-206B11.1)
 ENST00000624010 (RP11-206B11.1-001) 129262345-129262824 TEC
ENSG00000280196 (RP11-572C21.2)
 ENST00000622967 (RP11-572C21.2-001) 129839928-129840522 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_000390_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049971-ENSMUSG00000034310 CGP 10090 5:127632262-128433077
GeneTranscriptPositionBiotype
ENSMUSG00000029416 (Slc15a4)
solute carrier family 15, member 4 		ENSMUST00000031367 (Slc15a4-001) 127595664-127617416 protein_coding
ENSMUST00000124569 (Slc15a4-003) 127595667-127617226 nonsense_mediated_decay
ENSMUST00000144603 (Slc15a4-006) 127601930-127632880 nonsense_mediated_decay
ENSMUST00000152727 (Slc15a4-005) 127603807-127609351 protein_coding
ENSMUST00000153832 (Slc15a4-002) 127595667-127617418 nonsense_mediated_decay
ENSMUST00000155321 (Slc15a4-004) 127608793-127632897 protein_coding
ENSMUST00000182841 (Slc15a4-007) 127614446-127617381 retained_intron
ENSMUSG00000034310 (Tmem132d)
transmembrane protein 132D 		ENSMUST00000044441 (Tmem132d-001) 127783491-128433077 protein_coding
ENSMUSG00000049971 (Glt1d1)
glycosyltransferase 1 domain containing 1 		ENSMUST00000118139 (Glt1d1-001) 127632262-127708754 protein_coding
ENSMUST00000134529 (Glt1d1-003) 127657033-127689871 retained_intron
ENSMUST00000137157 (Glt1d1-002) 127632262-127691902 retained_intron
ENSMUSG00000061331 (Gm17132)
predicted gene 17132 		ENSMUST00000109542 (Gm17132-001) 127877333-127878490 unprocessed_pseudogene
ENSMUSG00000085328 (Gm17131)
predicted gene 17131 		ENSMUST00000164420 (Gm17131-001) 127878531-127882376 unprocessed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000390_0001ENSG00000151948ENST00000281703ENST00000413816ENST00000441390ENST00000442111ENST00000537468ENST00000539044ENSG00000151952ENST00000389441ENST00000422113ENST00000619366ENSG00000237578ENST00000417598ENSG00000251536ENST00000502221ENSG00000255838ENST00000539058ENSG00000256085ENST00000539362ENSG00000256137ENST00000544036ENSG00000256581ENST00000540920ENSG00000256699ENST00000542578ENSG00000280051ENST00000624010ENSG00000280196ENST00000622967CIL_000390_0002ENSMUSG00000029416ENSMUST00000031367ENSMUST00000124569ENSMUST00000144603ENSMUST00000152727ENSMUST00000153832ENSMUST00000155321ENSMUST00000182841ENSMUSG00000034310ENSMUST00000044441ENSMUSG00000049971ENSMUST00000118139ENSMUST00000134529ENSMUST00000137157ENSMUSG00000061331ENSMUST00000109542ENSMUSG00000085328ENSMUST00000164420
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000390_0001ENSG00000151948ENST00000281703ENST00000413816ENST00000441390ENST00000442111ENST00000537468ENST00000539044ENSG00000151952ENST00000389441ENST00000422113ENST00000619366ENSG00000237578ENST00000417598ENSG00000251536ENST00000502221ENSG00000255838ENST00000539058ENSG00000256085ENST00000539362ENSG00000256137ENST00000544036ENSG00000256581ENST00000540920ENSG00000256699ENST00000542578ENSG00000280051ENST00000624010ENSG00000280196ENST00000622967CIL_000390_0002ENSMUSG00000029416ENSMUST00000031367ENSMUST00000124569ENSMUST00000153832ENSMUSG00000034310ENSMUST00000044441ENSMUSG00000049971ENSMUST00000118139ENSMUST00000134529ENSMUST00000137157ENSMUSG00000061331ENSMUST00000109542ENSMUSG00000085328ENSMUST00000164420
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151948 ENST00000281703 0.623±0.00 0.090±0.00 N/A 4.532±0.00 N/A N/A 0.303±0.00 0.187±0.00 2.949±0.00 N/A N/A 0.133±0.03 0.329±0.01 N/A
ENST00000413816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A
ENST00000441390 N/A 0.132±0.00 N/A 1.488±0.00 N/A N/A 0.105±0.00 N/A N/A 0.734±0.00 0.294±0.20 N/A N/A 4.890±0.00
ENST00000442111 N/A N/A N/A 7.596±0.00 N/A 0.275±0.00 0.100±0.00 1.294±0.00 3.788±0.00 N/A N/A 0.092±0.00 0.428±0.00 6.460±1.90
ENST00000537468 N/A N/A 0.350±0.00 4.145±0.00 0.178±0.14 0.160±0.09 0.285±0.00 3.832±0.00 0.116±0.00 0.722±0.00 N/A 0.050±0.00 N/A 7.823±0.00
ENST00000539044 N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000151952 ENST00000389441 N/A N/A N/A N/A 0.003±0.00 0.036±0.00 N/A 0.140±0.00 N/A 0.035±0.00 N/A N/A N/A 0.033±0.00
ENST00000422113 N/A N/A N/A 2.368±1.02 N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A
ENST00000619366 0.003±0.00 N/A N/A 4.146±0.00 0.004±0.00 0.021±0.00 N/A 0.074±0.02 0.006±0.00 N/A N/A 0.017±0.00 N/A 0.144±0.00
ENSG00000237578 ENST00000417598 N/A N/A N/A 0.206±0.07 N/A N/A N/A N/A 0.260±0.00 0.541±0.00 N/A N/A N/A N/A
ENSG00000251536 ENST00000502221 0.102±0.00 0.176±0.00 N/A 0.076±0.00 0.094±0.00 0.049±0.00 0.081±0.00 0.060±0.00 0.017±0.00 0.023±0.00 0.041±0.00 0.023±0.00 N/A 0.852±0.52
ENSG00000255838 ENST00000539058 N/A 0.026±0.00 N/A 0.313±0.00 N/A N/A 0.024±0.00 N/A N/A N/A 0.023±0.00 N/A N/A N/A
ENSG00000256085 ENST00000539362 N/A N/A N/A 0.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256137 ENST00000544036 N/A N/A N/A 0.458±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.05
ENSG00000256581 ENST00000540920 N/A N/A N/A 0.032±0.00 N/A N/A 0.008±0.00 N/A 0.019±0.00 N/A N/A N/A N/A 0.028±0.00
ENSG00000256699 ENST00000542578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.906±0.52
ENSG00000280051 ENST00000624010 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00
ENSG00000280196 ENST00000622967 N/A N/A N/A 0.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029416 ENSMUST00000031367 2.948±1.10 9.680±3.57 5.592±0.64 3.197±1.93 12.529±4.54 7.225±1.54 1.791±0.73 3.390±2.30 4.102±1.19 11.574±2.90 2.550±0.68 14.269±6.24 3.975±1.91 4.458±0.00
ENSMUST00000124569 N/A N/A N/A 2.785±0.00 N/A N/A 0.681±0.00 N/A N/A N/A N/A 0.859±0.00 0.957±0.07 N/A
ENSMUST00000144603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153832 3.945±0.51 5.076±2.42 1.696±0.00 3.023±1.91 7.428±3.21 5.699±1.12 2.123±0.80 2.598±1.07 3.329±1.65 5.779±1.05 1.271±0.38 3.873±2.16 0.939±0.07 4.037±0.45
ENSMUST00000155321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034310 ENSMUST00000044441 0.040±0.02 0.018±0.01 0.017±0.00 4.619±4.08 0.031±0.01 0.007±0.00 0.009±0.00 N/A 0.004±0.00 0.807±0.20 0.015±0.01 0.052±0.02 0.017±0.01 0.024±0.02
ENSMUSG00000049971 ENSMUST00000118139 0.075±0.03 0.064±0.03 0.043±0.00 2.658±2.59 0.255±0.12 1.811±0.09 0.012±0.00 0.568±0.25 0.944±0.99 0.231±0.11 0.016±0.00 0.066±0.02 0.574±0.30 20.734±0.80
ENSMUST00000134529 0.368±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.00 3.024±0.00 N/A
ENSMUST00000137157 0.051±0.02 N/A N/A N/A 0.099±0.02 N/A 0.019±0.00 N/A 0.053±0.00 0.153±0.00 N/A 0.053±0.05 0.082±0.00 N/A
ENSMUSG00000061331 ENSMUST00000109542 3.879±0.79 3.636±1.90 7.791±1.71 37.370±9.77 5.399±1.49 3.629±1.69 5.809±1.29 4.848±0.08 15.724±12.17 7.787±2.84 4.054±0.76 14.347±8.59 14.911±5.58 53.051±52.76
ENSMUSG00000085328 ENSMUST00000164420 9.651±3.41 6.616±1.33 9.587±2.18 32.114±17.07 11.257±1.84 10.405±2.02 8.574±1.19 7.656±0.75 8.084±3.60 13.974±2.97 6.622±0.62 10.493±2.96 11.339±1.63 25.295±5.37

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