C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 15, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031367 Slc15a4-001 ENSMUSG00000029416 10090 - 5:127595664-127617416 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031367
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031367 2.948±1.10 9.680±3.57 5.592±0.64 3.197±1.93 12.529±4.54 7.225±1.54 1.791±0.73 3.390±2.30 4.102±1.19 11.574±2.90 2.550±0.68 14.269±6.24 3.975±1.91 4.458±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038Z CIL_00038Z_0002 CGP 5:127241808-127632897
CIL_00006M CIL_00006M_0003 CGP 5:127595664-127708754

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005290 IEA L-histidine transmembrane transporter activity
GO:0006857 IEA oligopeptide transport
GO:0015031 IEA protein transport
GO:0015293 IEA symporter activity
GO:0015817 IEA histidine transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266771 SLC15A4-001 protein_coding Homo_sapiens 0 1592
ENST00000366292 SLC15A4-004 retained_intron Homo_sapiens 0 422
ENST00000376740 SLC15A4-007 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000376744 SLC15A4-002 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000539703 SLC15A4-006 processed_transcript Homo_sapiens 0 407
ENST00000544112 SLC15A4-005 retained_intron Homo_sapiens 0 651
ENST00000545031 SLC15A4-008 retained_intron Homo_sapiens 0 348
ENST00000614634 SLC15A4-201 protein_coding Homo_sapiens 0 643

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