C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 15, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124569 Slc15a4-003 ENSMUSG00000029416 10090 - 5:127595667-127617226 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartOvaryPlacentaENSMUST00000124569
Transcript ID Brain Heart Ovary Placenta
ENSMUST00000124569 2.785±0.00 0.681±0.00 0.859±0.00 0.957±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038Z CIL_00038Z_0002 CGP 5:127241808-127632897
CIL_00006M CIL_00006M_0003 CGP 5:127595664-127708754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266771 SLC15A4-001 protein_coding Homo_sapiens 0 651
ENST00000366292 SLC15A4-004 retained_intron Homo_sapiens 0 695
ENST00000376740 SLC15A4-007 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000376744 SLC15A4-002 nonsense_mediated_decay Homo_sapiens 0 1245
ENST00000539703 SLC15A4-006 processed_transcript Homo_sapiens 0 486
ENST00000544112 SLC15A4-005 retained_intron Homo_sapiens 0 652
ENST00000545031 SLC15A4-008 retained_intron Homo_sapiens 0 348
ENST00000614634 SLC15A4-201 protein_coding Homo_sapiens 0 769

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