C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003BM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136802-ENSG00000175287 CGP 9606 9:128882112-128942041
GeneTranscriptPositionBiotype
ENSG00000136802 (LRRC8A)
leucine rich repeat containing 8 family, member A 		ENST00000259324 (LRRC8A-201) 128882502-128918034 protein_coding
ENST00000372599 (LRRC8A-002) 128882196-128918036 protein_coding
ENST00000372600 (LRRC8A-001) 128882112-128918039 protein_coding
ENST00000483638 (LRRC8A-004) 128884995-128886090 processed_transcript
ENST00000492784 (LRRC8A-003) 128912744-128916739 processed_transcript
ENSG00000171097 (CCBL1)
cysteine conjugate-beta lyase, cytoplasmic 		ENST00000302586 (CCBL1-001) 128833113-128882053 protein_coding
ENST00000320665 (CCBL1-002) 128833119-128881929 protein_coding
ENST00000416084 (CCBL1-007) 128837700-128846857 protein_coding
ENST00000427720 (CCBL1-009) 128838275-128845408 protein_coding
ENST00000436267 (CCBL1-201) 128832942-128882075 protein_coding
ENST00000451800 (CCBL1-005) 128836009-128882494 protein_coding
ENST00000462722 (CCBL1-004) 128832942-128882036 processed_transcript
ENST00000466418 (CCBL1-008) 128835178-128835511 processed_transcript
ENST00000474824 (CCBL1-006) 128837751-128881945 processed_transcript
ENST00000483599 (CCBL1-003) 128833123-128860532 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0003BM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000099041-ENSMUSG00000079484 CGP 10090 2:30240567-30282149
GeneTranscriptPositionBiotype
ENSMUSG00000007476 (Lrrc8a)
leucine rich repeat containing 8A 		ENSMUST00000095078 (Lrrc8a-001) 30237722-30263790 protein_coding
ENSMUST00000113654 (Lrrc8a-002) 30237715-30263785 protein_coding
ENSMUSG00000099041 (Gm28035)
predicted gene, 28035 		ENSMUST00000139454 (Gm28035-001) 30240567-30282148 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BM_0001ENSG00000136802ENST00000259324ENST00000372599ENST00000372600ENST00000483638ENST00000492784ENSG00000171097ENST00000302586ENST00000320665ENST00000416084ENST00000427720ENST00000436267ENST00000451800ENST00000462722ENST00000466418ENST00000474824ENST00000483599CIL_0003BM_0002ENSMUSG00000007476ENSMUST00000095078ENSMUST00000113654ENSMUSG00000099041ENSMUST00000139454
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BM_0001ENSG00000136802ENST00000259324ENST00000372599ENST00000372600ENSG00000171097ENST00000302586ENST00000320665ENST00000416084ENST00000436267ENST00000451800ENST00000462722ENST00000474824ENST00000483599CIL_0003BM_0002ENSMUSG00000007476ENSMUST00000095078ENSMUST00000113654ENSMUSG00000099041ENSMUST00000139454
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136802 ENST00000259324 N/A N/A N/A N/A N/A N/A N/A N/A 1.210±0.00 N/A 0.224±0.00 N/A N/A N/A
ENST00000372599 4.453±0.00 9.446±0.00 1.510±0.00 6.802±3.17 4.527±2.33 3.922±2.05 1.094±0.51 5.371±0.02 1.372±0.00 10.043±5.82 1.358±0.10 7.687±3.16 13.817±7.98 7.264±0.98
ENST00000372600 24.445±0.00 7.320±0.00 1.019±0.00 13.517±11.30 3.477±1.77 5.930±5.38 6.816±6.51 12.502±0.00 1.246±0.66 20.001±0.00 3.297±0.00 9.713±7.03 11.293±3.91 5.993±2.65
ENST00000483638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171097 ENST00000302586 1.445±0.00 1.895±0.00 0.107±0.00 9.014±0.00 0.542±0.51 2.176±0.00 2.000±1.82 3.481±0.00 1.767±0.00 1.491±0.00 3.327±0.00 3.043±0.38 2.180±1.13 2.301±0.52
ENST00000320665 N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A 0.906±0.00 2.164±0.00 0.774±0.41 N/A 0.631±0.00
ENST00000416084 N/A N/A N/A N/A N/A N/A 0.956±0.00 1.738±1.05 N/A N/A N/A N/A N/A N/A
ENST00000427720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436267 N/A 0.663±0.00 N/A N/A N/A 0.785±0.00 N/A N/A 0.440±0.00 N/A N/A 0.807±0.00 0.454±0.00 0.396±0.03
ENST00000451800 N/A N/A 0.953±0.00 N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.992±0.00 0.346±0.00 0.400±0.00
ENST00000466418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474824 N/A N/A N/A 1.841±0.00 N/A N/A N/A N/A 0.167±0.00 N/A 2.032±0.00 N/A N/A N/A
ENST00000483599 N/A N/A N/A 0.253±0.00 N/A 0.053±0.00 N/A N/A 0.101±0.00 N/A N/A N/A N/A 0.267±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007476 ENSMUST00000095078 27.149±5.96 22.281±3.82 15.722±0.54 9.695±4.72 22.177±2.54 20.992±2.30 19.122±4.80 22.374±2.34 10.364±4.35 31.185±5.36 3.090±0.67 20.100±9.55 7.742±2.86 N/A
ENSMUST00000113654 N/A N/A N/A N/A N/A 4.956±0.00 N/A N/A N/A N/A 2.057±0.00 4.433±0.00 3.551±0.62 N/A
ENSMUSG00000099041 ENSMUST00000139454 N/A 7.571±0.00 N/A 6.011±2.16 7.015±0.00 4.206±0.08 6.434±0.59 6.799±0.00 5.277±0.00 N/A N/A 6.024±0.89 3.483±0.00 N/A

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