C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 26, subfamily b, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077705 Cyp26b1-201 ENSMUSG00000063415 10090 - 6:84571414-84593810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000077705
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000077705 0.939±1.16 0.361±0.11 0.371±0.03 0.243±0.13 0.853±0.74 0.947±0.59 0.893±0.21 0.530±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BT CIL_0003BT_0002 CGP 6:84008590-84593908
CIL_0003EG CIL_0003EG_0002 CGP 6:84571414-85069513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001709 IMP cell fate determination
GO:0001972 IEA retinoic acid binding
GO:0005506 IEA iron ion binding
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0007140 IMP male meiosis
GO:0007283 IMP spermatogenesis
GO:0008401 IEA retinoic acid 4-hydroxylase activity
GO:0009954 IMP proximal/distal pattern formation
GO:0010628 IMP positive regulation of gene expression
GO:0016020 IEA membrane
GO:0020037 IEA heme binding
GO:0030326 IMP embryonic limb morphogenesis
GO:0034653 IC retinoic acid catabolic process
GO:0042573 IC retinoic acid metabolic process
GO:0043587 IMP tongue morphogenesis
GO:0048384 IDA retinoic acid receptor signaling pathway
GO:0048387 IMP negative regulation of retinoic acid receptor signaling pathway
GO:0055114 IEA oxidation-reduction process
GO:0060349 IEA bone morphogenesis
GO:0061436 IMP establishment of skin barrier
GO:0070268 IMP cornification
GO:0071300 IEP cellular response to retinoic acid
GO:2001037 IMP positive regulation of tongue muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000001146 CYP26B1-001 protein_coding Homo_sapiens 0 2050
ENST00000412253 CYP26B1-002 protein_coding Homo_sapiens 0 1345
ENST00000461519 CYP26B1-004 protein_coding Homo_sapiens 0 438
ENST00000474509 CYP26B1-003 protein_coding Homo_sapiens 0 348
ENST00000546307 CYP26B1-201 protein_coding Homo_sapiens 0 1341

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