C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003I7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112149-ENSG00000008083 CGP 9606 6:14117256-15522040
GeneTranscriptPositionBiotype
ENSG00000008083 (JARID2)
jumonji, AT rich interactive domain 2 		ENST00000341776 (JARID2-001) 15246296-15522021 protein_coding
ENST00000397311 (JARID2-201) 15248855-15522040 protein_coding
ENST00000474854 (JARID2-002) 15501358-15508393 processed_transcript
ENSG00000112149 (CD83)
CD83 molecule 		ENST00000379153 (CD83-001) 14117641-14136918 protein_coding
ENST00000612003 (CD83-201) 14117256-14136918 protein_coding
ENSG00000216754 (RP1-190J20.2)
 ENST00000396909 (RP1-190J20.2-001) 15102946-15104130 processed_pseudogene
ENSG00000226673 (LINC01108)
long intergenic non-protein coding RNA 1108 		ENST00000427276 (LINC01108-001) 14280127-14285145 lincRNA
ENSG00000229646 (RP11-330A16.1)
 ENST00000414740 (RP11-330A16.1-001) 14597514-14599690 lincRNA
ENSG00000230631 (RP11-359N11.1)
 ENST00000455973 (RP11-359N11.1-001) 14229775-14231570 lincRNA
ENSG00000234261 (RP11-146I2.1)
 ENST00000437648 (RP11-146I2.1-001) 14976788-15090003 lincRNA
ENSG00000234540 (RP3-448I9.1)
 ENST00000434947 (RP3-448I9.1-001) 14394326-14404289 lincRNA
ENSG00000235488 (JARID2-AS1)
JARID2 antisense RNA 1 		ENST00000441978 (JARID2-AS1-001) 15247815-15248634 antisense
ENSG00000237346 (RP3-448I9.2)
 ENST00000456440 (RP3-448I9.2-001) 14391231-14393288 lincRNA
ENSG00000242989 (RN7SL332P)
RNA, 7SL, cytoplasmic 332, pseudogene 		ENST00000482163 (RN7SL332P-201) 15112968-15113221 misc_RNA
ENSG00000264687 (AL050335.1)
 ENST00000583406 (AL050335.1-201) 15149699-15149799 miRNA
ENSG00000271888 (RP11-560J1.2)
 ENST00000607711 (RP11-560J1.2-001) 15243923-15245000 lincRNA
CIL_0003I7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015396-ENSMUSG00000038518 CGP 10090 13:43785107-44921643
GeneTranscriptPositionBiotype
ENSMUSG00000015396 (Cd83)
CD83 antigen 		ENSMUST00000015540 (Cd83-201) 43785107-43803130 protein_coding
ENSMUSG00000038518 (Jarid2)
jumonji, AT rich interactive domain 2 		ENSMUST00000044608 (Jarid2-002) 44730823-44920995 protein_coding
ENSMUST00000172581 (Jarid2-012) 44734040-44874314 processed_transcript
ENSMUST00000172708 (Jarid2-016) 44730859-44874351 processed_transcript
ENSMUST00000172830 (Jarid2-015) 44729795-44823510 protein_coding
ENSMUST00000172924 (Jarid2-010) 44731859-44874342 processed_transcript
ENSMUST00000172977 (Jarid2-014) 44731598-44884748 nonsense_mediated_decay
ENSMUST00000173003 (Jarid2-008) 44840783-44896481 nonsense_mediated_decay
ENSMUST00000173246 (Jarid2-001) 44731271-44921643 protein_coding
ENSMUST00000173367 (Jarid2-007) 44730838-44903258 protein_coding
ENSMUST00000173704 (Jarid2-003) 44730774-44920108 protein_coding
ENSMUST00000173906 (Jarid2-006) 44840691-44914319 protein_coding
ENSMUST00000174068 (Jarid2-011) 44729535-44848340 protein_coding
ENSMUST00000174086 (Jarid2-013) 44731287-44823403 protein_coding
ENSMUST00000174394 (Jarid2-009) 44729474-44731574 processed_transcript
ENSMUST00000174557 (Jarid2-004) 44731368-44885028 retained_intron
ENSMUST00000174683 (Jarid2-005) 44731370-44921640 retained_intron
ENSMUSG00000089815 (Gm5083)
predicted gene 5083 		ENSMUST00000159595 (Gm5083-002) 44121294-44125179 lincRNA
ENSMUST00000163056 (Gm5083-001) 44121167-44125179 lincRNA
ENSMUSG00000098107 (Gm27007)
predicted gene, 27007 		ENSMUST00000183264 (Gm27007-001) 44400436-44455303 lincRNA
ENSMUSG00000098144 (1700029N11Rik)
RIKEN cDNA 1700029N11 gene 		ENSMUST00000182568 (1700029N11Rik-001) 44439727-44457569 lincRNA
ENSMUST00000190628 (1700029N11Rik-002) 44439712-44457566 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003I7_0001ENSG00000008083ENST00000341776ENST00000397311ENST00000474854ENSG00000112149ENST00000379153ENST00000612003ENSG00000216754ENST00000396909ENSG00000226673ENST00000427276ENSG00000229646ENST00000414740ENSG00000230631ENST00000455973ENSG00000234261ENST00000437648ENSG00000234540ENST00000434947ENSG00000235488ENST00000441978ENSG00000237346ENST00000456440ENSG00000242989ENST00000482163ENSG00000264687ENST00000583406ENSG00000271888ENST00000607711CIL_0003I7_0002ENSMUSG00000015396ENSMUST00000015540ENSMUSG00000038518ENSMUST00000044608ENSMUST00000172581ENSMUST00000172708ENSMUST00000172830ENSMUST00000172924ENSMUST00000172977ENSMUST00000173003ENSMUST00000173246ENSMUST00000173367ENSMUST00000173704ENSMUST00000173906ENSMUST00000174068ENSMUST00000174086ENSMUST00000174394ENSMUST00000174557ENSMUST00000174683ENSMUSG00000089815ENSMUST00000159595ENSMUST00000163056ENSMUSG00000098107ENSMUST00000183264ENSMUSG00000098144ENSMUST00000182568ENSMUST00000190628
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003I7_0001ENSG00000008083ENST00000341776ENST00000397311ENSG00000112149ENST00000379153ENST00000612003ENSG00000216754ENST00000396909ENSG00000226673ENST00000427276ENSG00000229646ENST00000414740ENSG00000230631ENST00000455973ENSG00000234261ENST00000437648ENSG00000234540ENST00000434947ENSG00000235488ENST00000441978ENSG00000237346ENST00000456440ENSG00000242989ENST00000482163ENSG00000264687ENST00000583406ENSG00000271888ENST00000607711CIL_0003I7_0002ENSMUSG00000015396ENSMUST00000015540ENSMUSG00000038518ENSMUST00000044608ENSMUST00000172581ENSMUST00000173246ENSMUST00000173367ENSMUST00000173704ENSMUST00000173906ENSMUST00000174683ENSMUSG00000089815ENSMUST00000159595ENSMUST00000163056ENSMUSG00000098107ENSMUST00000183264ENSMUSG00000098144ENSMUST00000182568
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008083 ENST00000341776 1.322±0.00 0.857±0.00 0.270±0.00 2.108±1.39 1.935±0.37 1.881±0.00 1.078±0.40 0.286±0.00 1.074±0.90 2.139±0.00 1.173±0.00 1.169±0.58 2.805±1.12 4.683±1.33
ENST00000397311 1.252±0.00 1.742±0.00 N/A 0.667±0.12 0.725±0.00 1.441±0.00 N/A 1.653±0.00 0.925±0.00 1.351±0.00 1.421±0.00 1.051±0.50 0.831±0.30 7.332±4.54
ENST00000474854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000112149 ENST00000379153 N/A 8.149±0.00 N/A 6.270±1.98 4.322±2.11 N/A 0.135±0.00 10.921±0.00 0.303±0.00 8.034±4.88 0.364±0.00 4.578±3.05 1.765±0.50 2.987±1.85
ENST00000612003 0.576±0.00 N/A 2.718±0.00 N/A N/A 0.743±0.00 0.219±0.08 0.941±0.00 0.868±0.00 N/A 0.465±0.00 2.779±0.38 1.809±1.61 N/A
ENSG00000216754 ENST00000396909 N/A 0.017±0.00 N/A N/A 0.033±0.00 0.015±0.00 N/A N/A 0.015±0.00 N/A N/A N/A N/A 0.115±0.04
ENSG00000226673 ENST00000427276 0.005±0.00 0.030±0.00 N/A N/A 0.015±0.00 0.014±0.00 0.012±0.00 0.177±0.00 N/A 0.282±0.08 N/A 0.061±0.08 N/A 0.027±0.00
ENSG00000229646 ENST00000414740 N/A 0.278±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 0.371±0.00
ENSG00000230631 ENST00000455973 N/A N/A N/A 0.049±0.00 N/A N/A N/A 1.410±0.00 N/A 0.469±0.00 N/A N/A N/A 0.079±0.00
ENSG00000234261 ENST00000437648 0.028±0.00 N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A 0.171±0.10 0.025±0.01
ENSG00000234540 ENST00000434947 N/A N/A 0.404±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00
ENSG00000235488 ENST00000441978 0.452±0.00 0.395±0.00 2.050±0.00 0.096±0.00 0.174±0.00 N/A 0.175±0.03 N/A 0.659±0.00 N/A 0.070±0.00 0.895±0.71 1.161±0.91 10.068±3.67
ENSG00000237346 ENST00000456440 N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00
ENSG00000242989 ENST00000482163 0.074±0.00 0.079±0.00 N/A N/A N/A 0.075±0.00 N/A 0.481±0.00 N/A 0.236±0.00 N/A N/A N/A N/A
ENSG00000264687 ENST00000583406 0.235±0.00 5.789±0.00 N/A 0.521±0.00 1.835±0.00 0.469±0.00 N/A 2.797±0.00 0.479±0.00 3.698±0.00 0.934±0.00 9.695±8.51 N/A 1.171±0.49
ENSG00000271888 ENST00000607711 0.384±0.00 0.122±0.00 N/A 0.173±0.00 0.246±0.00 N/A 0.086±0.00 0.108±0.02 0.032±0.00 0.097±0.00 0.016±0.00 0.330±0.09 0.168±0.07 0.414±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015396 ENSMUST00000015540 7.285±3.02 2.393±0.91 2.210±0.64 2.411±0.54 13.611±4.83 4.249±1.22 1.671±0.16 1.563±0.44 0.454±0.15 5.241±0.72 0.609±0.82 5.451±1.36 7.172±6.37 0.057±0.03
ENSMUSG00000038518 ENSMUST00000044608 N/A 0.452±0.00 N/A 2.740±0.53 1.431±0.00 1.914±0.00 N/A N/A 1.483±0.42 1.085±0.00 N/A 3.298±1.40 3.060±0.31 1.480±0.26
ENSMUST00000172581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.795±0.00 42.426±0.00
ENSMUST00000172708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173246 3.701±0.64 1.171±0.51 7.352±0.18 10.020±0.78 2.773±0.65 2.451±0.81 1.689±0.59 3.487±1.43 2.458±1.86 2.552±0.72 3.318±0.60 3.114±1.74 6.734±0.51 1.545±0.71
ENSMUST00000173367 N/A 1.450±0.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173704 3.209±1.12 0.741±0.00 N/A 1.854±0.00 2.274±0.75 2.177±1.13 1.158±0.29 1.917±0.60 0.970±0.63 0.802±0.12 1.761±0.00 4.208±1.27 5.870±1.90 4.806±1.30
ENSMUST00000173906 2.203±0.00 2.753±0.51 N/A N/A 2.731±0.16 2.261±0.66 N/A 1.971±0.00 0.377±0.05 1.272±0.00 N/A 2.697±0.72 N/A 2.263±0.00
ENSMUST00000174068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174683 0.618±0.03 N/A N/A 1.211±0.50 0.843±0.02 0.899±0.20 0.326±0.02 0.519±0.03 N/A 0.509±0.12 N/A 1.004±0.18 N/A N/A
ENSMUSG00000089815 ENSMUST00000159595 N/A 0.164±0.00 N/A 0.058±0.00 0.062±0.00 N/A 0.028±0.00 N/A N/A 0.042±0.00 N/A 0.148±0.14 0.034±0.00 N/A
ENSMUST00000163056 N/A N/A N/A 0.175±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.01
ENSMUSG00000098107 ENSMUST00000183264 N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000098144 ENSMUST00000182568 N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.09 N/A N/A N/A N/A 3.795±0.84
ENSMUST00000190628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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