C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074909-ENSDARG00000074909 CGP 7955 9:3484122-3516167
GeneTranscriptPositionBiotype
ENSDARG00000017359 (mettl8)
methyltransferase like 8 		ENSDART00000008606 (mettl8-001) 3515641-3531474 protein_coding
ENSDARG00000074909 (dcaf17)
ddb1 and cul4 associated factor 17 		ENSDART00000076012 (dcaf17-201) 3484122-3515703 protein_coding
ENSDART00000139404 (dcaf17-002) 3504768-3516161 nonsense_mediated_decay
ENSDART00000145043 (dcaf17-001) 3495534-3516167 protein_coding
ENSDARG00000095577 (cybrd1)
cytochrome b reductase 1 		ENSDART00000102876 (cybrd1-001) 3487274-3492998 protein_coding
ENSDART00000136599 (cybrd1-002) 3487281-3493029 nonsense_mediated_decay

Danio rerio Ensembl (Zv9)

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CIL_0003IN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115827-ENSG00000071967 CGP 9606 2:171434217-171558133
GeneTranscriptPositionBiotype
ENSG00000071967 (CYBRD1)
cytochrome b reductase 1 		ENST00000321348 (CYBRD1-001) 171522348-171558133 protein_coding
ENST00000375252 (CYBRD1-003) 171522477-171557646 protein_coding
ENST00000409484 (CYBRD1-002) 171522247-171555607 protein_coding
ENST00000445146 (CYBRD1-007) 171523079-171554607 protein_coding
ENST00000468308 (CYBRD1-004) 171522348-171551140 processed_transcript
ENST00000474182 (CYBRD1-005) 171522510-171541772 processed_transcript
ENST00000494587 (CYBRD1-006) 171522511-171541128 processed_transcript
ENSG00000123600 (METTL8)
methyltransferase like 8 		ENST00000375258 (METTL8-001) 171317409-171434086 protein_coding
ENST00000392599 (METTL8-009) 171330625-171434018 protein_coding
ENST00000392604 (METTL8-002) 171323933-171434087 nonsense_mediated_decay
ENST00000438609 (METTL8-011) 171323921-171339256 protein_coding
ENST00000442541 (METTL8-004) 171339541-171433990 protein_coding
ENST00000442778 (METTL8-006) 171339331-171434780 protein_coding
ENST00000447486 (METTL8-003) 171323251-171434109 nonsense_mediated_decay
ENST00000453846 (METTL8-016) 171339475-171434780 protein_coding
ENST00000460188 (METTL8-007) 171324243-171434788 processed_transcript
ENST00000460539 (METTL8-008) 171331808-171433116 processed_transcript
ENST00000462821 (METTL8-005) 171337472-171434802 processed_transcript
ENST00000463392 (METTL8-012) 171323901-171327065 processed_transcript
ENST00000464491 (METTL8-013) 171324025-171326381 retained_intron
ENST00000470773 (METTL8-015) 171324101-171326153 retained_intron
ENST00000477130 (METTL8-010) 171323998-171339213 processed_transcript
ENST00000483284 (METTL8-014) 171323788-171332795 retained_intron
ENST00000612742 (METTL8-201) 171317405-171434802 protein_coding
ENSG00000228507 (DAP3P2)
death associated protein 3 pseudogene 2 		ENST00000458547 (DAP3P2-001) 171491422-171491931 processed_pseudogene
ENSG00000233762 (AC007969.5)
 ENST00000433675 (AC007969.5-001) 171517270-171517716 processed_pseudogene
ENSG00000234061 (AC007969.4)
 ENST00000441891 (AC007969.4-001) 171492905-171493095 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003IN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041966-ENSMUSG00000027015 CGP 10090 2:71055328-71142926
GeneTranscriptPositionBiotype
ENSMUSG00000027015 (Cybrd1)
cytochrome b reductase 1 		ENSMUST00000028403 (Cybrd1-001) 71117923-71142926 protein_coding
ENSMUSG00000041966 (Dcaf17)
DDB1 and CUL4 associated factor 17 		ENSMUST00000064141 (Dcaf17-007) 71055781-71099142 protein_coding
ENSMUST00000102701 (Dcaf17-004) 71055852-71088644 protein_coding
ENSMUST00000112159 (Dcaf17-003) 71055784-71083458 protein_coding
ENSMUST00000112167 (Dcaf17-006) 71055846-71090278 nonsense_mediated_decay
ENSMUST00000130292 (Dcaf17-002) 71055328-71086618 protein_coding
ENSMUST00000132619 (Dcaf17-009) 71075342-71082053 processed_transcript
ENSMUST00000135357 (Dcaf17-008) 71055758-71078164 protein_coding
ENSMUST00000136299 (Dcaf17-005) 71063424-71078145 nonsense_mediated_decay
ENSMUST00000154704 (Dcaf17-001) 71055744-71095858 protein_coding
ENSMUSG00000041975 (Mettl8)
methyltransferase like 8 		ENSMUST00000090849 (Mettl8-006) 70978924-71055572 protein_coding
ENSMUST00000100037 (Mettl8-002) 70964561-71055583 protein_coding
ENSMUST00000112179 (Mettl8-011) 70964561-71055583 nonsense_mediated_decay
ENSMUST00000112186 (Mettl8-001) 70964561-71055583 protein_coding
ENSMUST00000121586 (Mettl8-010) 70965437-71018374 protein_coding
ENSMUST00000124208 (Mettl8-005) 70981059-71055583 retained_intron
ENSMUST00000124273 (Mettl8-004) 70993345-71018378 retained_intron
ENSMUST00000124781 (Mettl8-007) 70967050-70976659 retained_intron
ENSMUST00000140293 (Mettl8-009) 70966165-70973388 protein_coding
ENSMUST00000148876 (Mettl8-003) 70964561-71055583 nonsense_mediated_decay
ENSMUST00000149181 (Mettl8-008) 70966483-70982184 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IN_0001ENSDARG00000017359ENSDART00000008606ENSDARG00000074909ENSDART00000076012ENSDART00000139404ENSDART00000145043ENSDARG00000095577ENSDART00000102876ENSDART00000136599CIL_0003IN_0002ENSG00000071967ENST00000321348ENST00000375252ENST00000409484ENST00000445146ENST00000468308ENST00000474182ENST00000494587ENSG00000123600ENST00000375258ENST00000392599ENST00000392604ENST00000438609ENST00000442541ENST00000442778ENST00000447486ENST00000453846ENST00000460188ENST00000460539ENST00000462821ENST00000463392ENST00000464491ENST00000470773ENST00000477130ENST00000483284ENST00000612742ENSG00000228507ENST00000458547ENSG00000233762ENST00000433675ENSG00000234061ENST00000441891CIL_0003IN_0003ENSMUSG00000027015ENSMUST00000028403ENSMUSG00000041966ENSMUST00000064141ENSMUST00000102701ENSMUST00000112159ENSMUST00000112167ENSMUST00000130292ENSMUST00000132619ENSMUST00000135357ENSMUST00000136299ENSMUST00000154704ENSMUSG00000041975ENSMUST00000090849ENSMUST00000100037ENSMUST00000112179ENSMUST00000112186ENSMUST00000121586ENSMUST00000124208ENSMUST00000124273ENSMUST00000124781ENSMUST00000140293ENSMUST00000148876ENSMUST00000149181
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IN_0001ENSDARG00000017359ENSDART00000008606ENSDARG00000074909ENSDART00000076012ENSDART00000145043ENSDARG00000095577ENSDART00000102876CIL_0003IN_0002ENSG00000071967ENST00000321348ENST00000375252ENST00000409484ENSG00000123600ENST00000375258ENST00000612742ENSG00000228507ENST00000458547ENSG00000233762ENST00000433675ENSG00000234061ENST00000441891CIL_0003IN_0003ENSMUSG00000027015ENSMUST00000028403ENSMUSG00000041966ENSMUST00000064141ENSMUST00000102701ENSMUST00000112167ENSMUST00000130292ENSMUST00000154704ENSMUSG00000041975ENSMUST00000090849ENSMUST00000100037ENSMUST00000112179ENSMUST00000112186
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017359 ENSDART00000008606 N/A N/A N/A 2.229±0.42 N/A N/A N/A N/A 0.564±0.00 N/A N/A N/A N/A N/A
ENSDARG00000074909 ENSDART00000076012 N/A N/A N/A 2.391±0.96 N/A N/A N/A 1.152±0.00 0.099±0.00 N/A N/A N/A N/A N/A
ENSDART00000139404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145043 N/A N/A N/A 1.507±0.49 N/A N/A 1.472±0.00 2.094±0.00 0.460±0.00 N/A 0.543±0.00 N/A N/A N/A
ENSDARG00000095577 ENSDART00000102876 N/A N/A N/A N/A N/A N/A 17.604±5.73 18.650±0.00 N/A N/A 1.013±0.00 N/A N/A N/A
ENSDART00000136599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071967 ENST00000321348 96.765±0.00 15.286±0.00 2.789±0.00 7.326±3.15 42.178±19.26 42.353±33.68 15.742±12.01 6.473±4.75 8.909±6.58 52.371±27.69 4.829±3.28 33.858±23.09 8.089±2.50 22.498±17.38
ENST00000375252 N/A N/A 2.338±0.00 3.585±1.03 16.105±0.00 6.720±0.00 6.756±0.00 1.338±0.00 26.642±0.00 18.384±0.00 2.849±0.00 5.471±4.22 2.160±0.00 1.363±0.00
ENST00000409484 N/A N/A 2.492±0.00 N/A 16.619±0.00 N/A 6.706±0.00 N/A 26.198±0.00 20.439±0.00 2.950±0.00 8.663±0.00 5.265±0.00 N/A
ENST00000445146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000123600 ENST00000375258 N/A N/A 0.727±0.00 0.822±0.00 N/A 0.614±0.00 N/A N/A 1.324±0.00 N/A N/A 0.666±0.00 0.335±0.07 0.792±0.00
ENST00000392599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612742 1.131±0.00 N/A N/A N/A 1.470±0.00 N/A 0.385±0.09 0.817±0.01 0.225±0.00 0.631±0.00 N/A 2.060±1.40 N/A 0.714±0.00
ENSG00000228507 ENST00000458547 0.052±0.00 0.134±0.00 N/A 0.027±0.00 N/A 0.169±0.00 0.048±0.00 N/A N/A N/A N/A 0.091±0.00 0.126±0.01 0.137±0.04
ENSG00000233762 ENST00000433675 0.219±0.00 0.903±0.00 N/A N/A 0.565±0.00 0.322±0.19 N/A N/A N/A 0.754±0.00 0.221±0.00 1.956±1.62 0.382±0.20 0.539±0.00
ENSG00000234061 ENST00000441891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.550±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027015 ENSMUST00000028403 2.028±1.44 0.241±0.07 1.534±0.07 2.115±1.88 0.180±0.03 1.446±0.24 0.798±0.05 0.197±0.07 0.567±0.52 5.984±0.67 0.110±0.04 4.985±1.75 0.642±0.42 1.147±0.61
ENSMUSG00000041966 ENSMUST00000064141 N/A 4.275±0.42 N/A N/A 1.626±0.00 1.666±0.47 N/A 1.218±0.00 1.253±0.01 N/A 0.699±0.05 2.574±0.14 3.378±0.80 3.071±0.53
ENSMUST00000102701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.657±0.00 N/A
ENSMUST00000112159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.172±0.00
ENSMUST00000130292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.442±0.08
ENSMUST00000132619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154704 1.483±0.69 1.706±0.26 1.743±0.47 1.697±0.45 1.657±0.25 1.045±0.09 0.382±0.23 0.708±0.42 1.604±0.55 1.404±0.38 0.320±0.18 2.055±0.60 1.601±0.46 0.894±0.24
ENSMUSG00000041975 ENSMUST00000090849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.637±0.26 N/A N/A
ENSMUST00000100037 N/A N/A N/A N/A 2.109±0.70 N/A 0.848±0.00 N/A 1.302±0.19 N/A N/A N/A N/A N/A
ENSMUST00000112179 N/A 1.795±0.13 N/A N/A N/A 0.922±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112186 2.417±0.96 1.675±0.20 3.249±0.20 3.452±0.44 1.556±0.22 1.397±0.30 1.022±0.13 2.768±1.12 2.909±1.39 2.965±0.59 1.446±0.48 3.487±1.73 2.492±0.75 N/A
ENSMUST00000121586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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