C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112167 Dcaf17-006 ENSMUSG00000041966 10090 + 2:71055846-71090278 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000112167
Transcript ID Testis
ENSMUST00000112167 1.172±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S9 CIL_0004S9_0002 CGP 2:70712407-71055583
CIL_0002PA CIL_0002PA_0002 CGP 2:70964561-71099142
CIL_0003IN CIL_0003IN_0003 CGP 2:71055328-71142926

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339506 DCAF17-003 protein_coding Homo_sapiens 0 909
ENST00000375255 DCAF17-001 protein_coding Homo_sapiens 0 1897
ENST00000431110 DCAF17-008 protein_coding Homo_sapiens 0 773
ENST00000436317 DCAF17-004 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000442778 METTL8-006 protein_coding Homo_sapiens 0.00000006 62
ENST00000453846 METTL8-016 protein_coding Homo_sapiens 0.0000008 58
ENST00000460188 METTL8-007 processed_transcript Homo_sapiens 0.0000002 60
ENST00000462821 METTL8-005 processed_transcript Homo_sapiens 0.0000002 60
ENST00000468592 DCAF17-002 processed_transcript Homo_sapiens 0 942
ENST00000480855 DCAF17-006 retained_intron Homo_sapiens 0 309
ENST00000490217 DCAF17-005 processed_transcript Homo_sapiens 0 472
ENST00000495925 DCAF17-010 processed_transcript Homo_sapiens 0 309
ENST00000498486 DCAF17-009 retained_intron Homo_sapiens 0 401
ENST00000539783 DCAF17-201 protein_coding Homo_sapiens 0 1131
ENST00000611110 DCAF17-202 protein_coding Homo_sapiens 0 909
ENST00000612742 METTL8-201 protein_coding Homo_sapiens 0.0000009 62

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