C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003JC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088943-ENSDARG00000091195 CGP 7955 10:37976892-38041744
GeneTranscriptPositionBiotype
ENSDARG00000088943 (PLEKHB1 (2 of 2))
pleckstrin homology domain containing, family B (evectins) member 1
ENSDART00000123508 (PLEKHB1 (2 of 2)-201) 37976892-37982614 protein_coding
CIL_0003JC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000021300-ENSG00000175582 CGP 9606 11:73646178-73761137
GeneTranscriptPositionBiotype
ENSG00000021300 (PLEKHB1)
pleckstrin homology domain containing, family B (evectins) member 1
ENST00000227214 (PLEKHB1-003) 73647549-73662819 protein_coding
ENST00000354190 (PLEKHB1-001) 73646178-73662819 protein_coding
ENST00000398492 (PLEKHB1-002) 73646178-73662819 protein_coding
ENST00000398494 (PLEKHB1-004) 73647609-73662819 protein_coding
ENST00000426191 (PLEKHB1-008) 73652440-73662812 retained_intron
ENST00000535129 (PLEKHB1-007) 73648690-73661720 protein_coding
ENST00000535582 (PLEKHB1-013) 73647655-73660770 protein_coding
ENST00000536527 (PLEKHB1-009) 73646579-73651437 protein_coding
ENST00000538227 (PLEKHB1-016) 73647655-73660873 protein_coding
ENST00000539157 (PLEKHB1-015) 73647655-73660756 protein_coding
ENST00000540157 (PLEKHB1-021) 73652620-73660925 retained_intron
ENST00000540431 (PLEKHB1-023) 73649012-73661551 protein_coding
ENST00000541597 (PLEKHB1-019) 73647932-73661522 protein_coding
ENST00000541760 (PLEKHB1-017) 73647689-73652070 retained_intron
ENST00000542389 (PLEKHB1-020) 73648914-73660795 protein_coding
ENST00000543085 (PLEKHB1-010) 73647626-73661665 protein_coding
ENST00000543524 (PLEKHB1-018) 73647714-73661496 protein_coding
ENST00000544282 (PLEKHB1-024) 73662353-73662815 processed_transcript
ENST00000544532 (PLEKHB1-011) 73647653-73651879 processed_transcript
ENST00000545106 (PLEKHB1-022) 73660309-73661734 retained_intron
ENST00000545798 (PLEKHB1-012) 73647655-73651851 protein_coding
ENST00000546251 (PLEKHB1-014) 73647655-73660766 protein_coding
ENSG00000175582 (RAB6A)
RAB6A, member RAS oncogene family
ENST00000310653 (RAB6A-001) 73675638-73761137 protein_coding
ENST00000336083 (RAB6A-002) 73675896-73761091 protein_coding
ENST00000400470 (RAB6A-010) 73704164-73760610 protein_coding
ENST00000536566 (RAB6A-201) 73675638-73760093 protein_coding
ENST00000537446 (RAB6A-011) 73679686-73760658 nonsense_mediated_decay
ENST00000540771 (RAB6A-014) 73677944-73761119 protein_coding
ENST00000541588 (RAB6A-013) 73677894-73761074 protein_coding
ENST00000541795 (RAB6A-005) 73729464-73761017 retained_intron
ENST00000541973 (RAB6A-006) 73677399-73760095 protein_coding
ENST00000545625 (RAB6A-012) 73677908-73760638 nonsense_mediated_decay
ENSG00000255928 (RP11-456I15.2)
ENST00000538624 (RP11-456I15.2-001) 73722349-73722694 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JC_0001ENSDARG00000088943ENSDART00000123508CIL_0003JC_0002ENSG00000021300ENST00000227214ENST00000354190ENST00000398492ENST00000398494ENST00000426191ENST00000535129ENST00000535582ENST00000536527ENST00000538227ENST00000539157ENST00000540157ENST00000540431ENST00000541597ENST00000541760ENST00000542389ENST00000543085ENST00000543524ENST00000544282ENST00000544532ENST00000545106ENST00000545798ENST00000546251ENSG00000175582ENST00000310653ENST00000336083ENST00000400470ENST00000536566ENST00000537446ENST00000540771ENST00000541588ENST00000541795ENST00000541973ENST00000545625ENSG00000255928ENST00000538624
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JC_0001ENSDARG00000088943ENSDART00000123508CIL_0003JC_0002ENSG00000021300ENST00000227214ENST00000398494ENST00000426191ENST00000535129ENST00000535582ENST00000536527ENST00000538227ENST00000539157ENST00000540157ENST00000540431ENST00000541760ENST00000544282ENSG00000175582ENST00000310653ENST00000336083ENST00000536566ENST00000537446ENST00000541973ENSG00000255928ENST00000538624
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000088943 ENSDART00000123508 N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000021300 ENST00000227214 2.347±0.00 6.267±0.00 N/A 166.863±102.31 3.984±0.00 34.586±0.00 2.990±0.00 2.740±0.00 0.593±0.00 6.576±5.38 2.748±0.00 13.633±12.59 1.412±0.12 7.504±1.24
ENST00000354190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398494 N/A N/A N/A N/A N/A 0.519±0.00 N/A 0.064±0.00 0.446±0.00 N/A 0.351±0.00 N/A N/A N/A
ENST00000426191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.520±0.00
ENST00000535129 N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000535582 N/A N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A N/A N/A 2.700±0.00 N/A N/A
ENST00000536527 N/A N/A N/A N/A N/A N/A N/A N/A 0.375±0.00 N/A N/A N/A N/A N/A
ENST00000538227 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00 0.631±0.00 N/A N/A N/A
ENST00000539157 N/A N/A N/A N/A N/A 0.412±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.117±0.00
ENST00000540431 N/A N/A N/A N/A N/A 0.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541760 N/A N/A N/A N/A 1.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.651±0.00 N/A 1.197±0.00 N/A
ENST00000544532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175582 ENST00000310653 N/A N/A N/A N/A 5.123±0.00 4.576±0.00 N/A N/A N/A N/A N/A 7.749±0.00 N/A N/A
ENST00000336083 18.341±0.00 11.723±0.00 2.672±0.00 36.356±14.84 8.532±5.20 15.683±0.00 9.070±5.10 9.891±7.64 8.172±2.65 12.667±7.39 9.174±5.03 10.956±4.89 20.868±4.88 11.107±2.29
ENST00000400470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536566 5.199±0.00 7.514±0.00 4.846±0.00 15.917±0.00 7.858±0.00 11.641±0.00 4.329±1.77 8.204±4.17 4.432±0.11 8.762±0.00 4.041±0.00 5.127±2.60 16.606±1.31 7.111±4.03
ENST00000537446 N/A N/A N/A N/A N/A N/A 10.234±0.00 13.491±0.00 22.800±0.00 N/A 16.383±0.00 N/A N/A N/A
ENST00000540771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541973 18.868±0.00 N/A N/A N/A 15.639±0.00 9.267±1.08 5.321±0.00 6.844±0.00 12.030±0.00 17.120±0.00 6.560±0.00 14.426±2.69 32.778±0.00 12.051±0.00
ENST00000545625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255928 ENST00000538624 0.250±0.00 0.328±0.00 N/A N/A N/A N/A N/A 0.160±0.00 N/A N/A N/A 1.285±0.90 N/A 0.304±0.00

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