C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 16, KSP-cadherin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567269 CDH16-003 ENSG00000166589 9606 - 16:66908129-66918884 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyENST00000567269
Transcript ID Adipose Kidney
ENST00000567269 0.037±0.00 50.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0004IP CIL_0004IP_0001 CGP 16:66878589-66918984
CIL_0003LX CIL_0003LX_0002 CGP 16:66908122-66925644

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163783 Cdh16-201 protein_coding Mus_musculus 0 1419

Loading