C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003OB_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000060430-ENSDARG00000097485 | CGP | 7955 | 17:43610415-43658353  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000053558  (rtkn2a)rhotekin 2a |
ENSDART00000075596 (rtkn2a-201)
|
43655682-43668143 | protein_coding | |
|
ENSDART00000136431 (rtkn2a-001)
|
43655681-43668157 | protein_coding | ||
|
ENSDARG00000060430 (zfyve28) zinc finger, FYVE domain containing 28 |
ENSDART00000085124 (zfyve28-201)
|
43610435-43639592 | protein_coding | |
|
ENSDART00000139980 (zfyve28-001)
|
43610415-43639651 | protein_coding | ||
|
ENSDARG00000097485 (CFAP99) cilia and flagella associated protein 99 |
ENSDART00000156271 (CFAP99-001)
|
43640479-43658353 | protein_coding | |
| CIL_0003OB_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000159733-ENSG00000249428 | CGP | 9606 | 4:2269582-2462963 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000063978 (RNF4) ring finger protein 4 |
ENST00000314289 (RNF4-001)
|
2468937-2515855 | protein_coding | |
|
ENST00000502316 (RNF4-008)
|
2469097-2513811 | protein_coding | ||
|
ENST00000503123 (RNF4-017)
|
2469181-2497103 | processed_transcript | ||
|
ENST00000503659 (RNF4-010)
|
2462220-2497012 | protein_coding | ||
|
ENST00000504224 (RNF4-006)
|
2468729-2500738 | protein_coding | ||
|
ENST00000504782 (RNF4-012)
|
2469107-2490798 | retained_intron | ||
|
ENST00000506706 (RNF4-003)
|
2469453-2514474 | protein_coding | ||
|
ENST00000507247 (RNF4-020)
|
2469105-2513711 | protein_coding | ||
|
ENST00000507784 (RNF4-013)
|
2469137-2497300 | retained_intron | ||
|
ENST00000508235 (RNF4-022)
|
2512477-2625320 | nonsense_mediated_decay | ||
|
ENST00000509206 (RNF4-016)
|
2469194-2497079 | processed_transcript | ||
|
ENST00000509258 (RNF4-002)
|
2469106-2512334 | protein_coding | ||
|
ENST00000509388 (RNF4-007)
|
2469104-2513131 | processed_transcript | ||
|
ENST00000511600 (RNF4-005)
|
2479853-2515854 | protein_coding | ||
|
ENST00000511843 (RNF4-011)
|
2469106-2512590 | processed_transcript | ||
|
ENST00000511859 (RNF4-004)
|
2469140-2514503 | protein_coding | ||
|
ENST00000511892 (RNF4-015)
|
2469140-2497079 | processed_transcript | ||
|
ENST00000513284 (RNF4-019)
|
2469107-2512511 | nonsense_mediated_decay | ||
|
ENST00000513450 (RNF4-021)
|
2489811-2500698 | protein_coding | ||
|
ENST00000513578 (RNF4-014)
|
2469139-2500748 | nonsense_mediated_decay | ||
|
ENST00000513643 (RNF4-018)
|
2469159-2512597 | processed_transcript | ||
|
ENST00000541204 (RNF4-201)
|
2469068-2515854 | protein_coding | ||
|
ENSG00000159733 (ZFYVE28) zinc finger, FYVE domain containing 28 |
ENST00000290974 (ZFYVE28-001)
|
2269598-2418663 | protein_coding | |
|
ENST00000503000 (ZFYVE28-003)
|
2330162-2418609 | protein_coding | ||
|
ENST00000504743 (ZFYVE28-010)
|
2341316-2364827 | processed_transcript | ||
|
ENST00000505421 (ZFYVE28-011)
|
2342581-2343524 | processed_transcript | ||
|
ENST00000508184 (ZFYVE28-009)
|
2339517-2406665 | protein_coding | ||
|
ENST00000508471 (ZFYVE28-004)
|
2269582-2287715 | protein_coding | ||
|
ENST00000509171 (ZFYVE28-008)
|
2328806-2418651 | protein_coding | ||
|
ENST00000511071 (ZFYVE28-002)
|
2270339-2418636 | protein_coding | ||
|
ENST00000514248 (ZFYVE28-012)
|
2270918-2271751 | retained_intron | ||
|
ENST00000515169 (ZFYVE28-007)
|
2328534-2364804 | protein_coding | ||
|
ENST00000515312 (ZFYVE28-006)
|
2270495-2364877 | protein_coding | ||
|
ENSG00000239247 (RN7SL589P) RNA, 7SL, cytoplasmic 589, pseudogene |
ENST00000481268 (RN7SL589P-201)
|
2316197-2316506 | misc_RNA | |
|
ENSG00000249077 (RP11-478C1.8) |
ENST00000506116 (RP11-478C1.8-001)
|
2324467-2325082 | processed_pseudogene | |
|
ENSG00000251148 (RP11-478C1.7) |
ENST00000510632 (RP11-478C1.7-001)
|
2295584-2319089 | antisense | |
Expression Patterns
|
