C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ring finger protein 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000508235  |
RNF4-022 |
ENSG00000063978 |
9606 | + |
4:2512477-2625320  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003OB | CIL_0003OB_0002 | CGP | 4:2269582-2462963 |
| CIL_00057G | CIL_00057G_0001 | CGP | 4:2462220-2732565 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000180376
|
Fam193a-001 | protein_coding | Mus_musculus | 0 | 414 |
|
ENSMUST00000182047
|
Rnf4-006 | protein_coding | Mus_musculus | 0 | 370 |
|
ENSMUST00000030992
|
Rnf4-001 | protein_coding | Mus_musculus | 0 | 370 |
|
ENSMUST00000182709
|
Rnf4-002 | protein_coding | Mus_musculus | 0 | 370 |
|
ENSMUST00000119524
|
Gm16074-001 | processed_pseudogene | Mus_musculus | 0 | 200 |
|
ENSMUST00000183265
|
Rnf4-003 | retained_intron | Mus_musculus | 4.2039e-45 | 185 |
|
ENSMUST00000182970
|
Rnf4-004 | retained_intron | Mus_musculus | 6e-28 | 128 |
|
ENSMUST00000181991
|
Rnf4-011 | processed_transcript | Mus_musculus | 6e-23 | 111 |
|
ENSMUST00000182583
|
Rnf4-005 | protein_coding | Mus_musculus | 3e-21 | 106 |
