C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137198-ENSG00000124788 CGP 9606 6:16238580-16761491
GeneTranscriptPositionBiotype
ENSG00000124788 (ATXN1)
ataxin 1 		ENST00000244769 (ATXN1-001) 16299112-16761456 protein_coding
ENST00000436367 (ATXN1-201) 16299112-16761490 protein_coding
ENST00000467008 (ATXN1-004) 16736851-16761476 processed_transcript
ENST00000473388 (ATXN1-008) 16485135-16761460 processed_transcript
ENST00000479680 (ATXN1-006) 16752962-16761479 processed_transcript
ENST00000483591 (ATXN1-002) 16432564-16750092 processed_transcript
ENST00000483954 (ATXN1-009) 16666968-16761456 processed_transcript
ENST00000492857 (ATXN1-003) 16739602-16761463 processed_transcript
ENST00000495178 (ATXN1-007) 16614975-16753308 processed_transcript
ENST00000498374 (ATXN1-005) 16738465-16761491 processed_transcript
ENSG00000137198 (GMPR)
guanosine monophosphate reductase 		ENST00000259727 (GMPR-001) 16238580-16295549 protein_coding
ENST00000540478 (GMPR-003) 16289945-16295121 retained_intron
ENST00000543191 (GMPR-002) 16257973-16295328 processed_transcript
ENST00000544145 (GMPR-004) 16289518-16295544 processed_transcript
ENSG00000229931 (RP1-151F17.1)
 ENST00000423260 (RP1-151F17.1-001) 16761138-16762652 antisense
ENST00000450930 (RP1-151F17.1-002) 16761912-16762618 antisense
CIL_0003RQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000253-ENSMUSG00000046876 CGP 10090 13:45507444-45964991
GeneTranscriptPositionBiotype
ENSMUSG00000000253 (Gmpr)
guanosine monophosphate reductase 		ENSMUST00000000260 (Gmpr-001) 45507444-45546382 protein_coding
ENSMUST00000128873 (Gmpr-002) 45513840-45545898 protein_coding
ENSMUST00000129176 (Gmpr-003) 45538809-45542550 retained_intron
ENSMUSG00000046876 (Atxn1)
ataxin 1 		ENSMUST00000091628 (Atxn1-201) 45549758-45964991 protein_coding
ENSMUST00000167708 (Atxn1-202) 45549758-45964991 protein_coding
ENSMUST00000180110 (Atxn1-203) 45549758-45964991 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RQ_0001ENSG00000124788ENST00000244769ENST00000436367ENST00000467008ENST00000473388ENST00000479680ENST00000483591ENST00000483954ENST00000492857ENST00000495178ENST00000498374ENSG00000137198ENST00000259727ENST00000540478ENST00000543191ENST00000544145ENSG00000229931ENST00000423260ENST00000450930CIL_0003RQ_0002ENSMUSG00000000253ENSMUST00000000260ENSMUST00000128873ENSMUST00000129176ENSMUSG00000046876ENSMUST00000091628ENSMUST00000167708ENSMUST00000180110
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RQ_0001ENSG00000124788ENST00000244769ENST00000436367ENST00000467008ENST00000473388ENSG00000137198ENST00000259727ENST00000543191ENST00000544145ENSG00000229931ENST00000423260ENST00000450930CIL_0003RQ_0002ENSMUSG00000000253ENSMUST00000000260ENSMUST00000128873ENSMUSG00000046876ENSMUST00000091628ENSMUST00000167708ENSMUST00000180110
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124788 ENST00000244769 N/A N/A N/A 3.653±2.11 N/A N/A N/A 0.359±0.00 0.324±0.00 0.956±0.00 N/A 0.943±0.11 N/A N/A
ENST00000436367 2.650±0.00 1.494±0.00 0.930±0.00 3.728±1.50 3.742±0.65 3.139±0.38 3.559±0.00 1.065±0.10 3.248±2.26 2.870±0.00 3.829±0.00 2.564±0.24 1.129±0.71 2.216±1.09
ENST00000467008 N/A 1.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.277±0.00 0.551±0.00 N/A
ENST00000473388 N/A N/A N/A N/A N/A 5.170±0.00 4.970±0.00 N/A 8.505±0.00 7.371±0.00 4.677±0.00 7.860±0.00 N/A N/A
ENST00000479680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137198 ENST00000259727 3.188±0.00 3.782±0.00 1.918±0.00 9.894±0.00 3.110±1.91 3.155±2.33 19.606±16.72 22.747±0.00 1.461±1.04 6.304±5.36 83.723±68.33 16.341±8.97 11.311±2.41 37.037±8.74
ENST00000540478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543191 1.421±0.00 N/A N/A 7.330±0.00 N/A 7.049±0.00 N/A 5.402±3.57 N/A N/A N/A 12.585±0.00 6.692±0.00 39.656±0.00
ENST00000544145 N/A 1.812±0.00 N/A 0.563±0.00 3.802±0.00 N/A N/A N/A N/A 1.002±0.00 39.322±0.00 16.338±2.55 11.113±0.00 21.927±9.85
ENSG00000229931 ENST00000423260 N/A N/A N/A 0.117±0.00 0.553±0.00 0.344±0.00 0.807±0.00 0.135±0.00 0.221±0.13 0.536±0.22 N/A 0.340±0.00 0.199±0.00 0.616±0.00
ENST00000450930 0.293±0.00 0.536±0.00 N/A 0.588±0.00 0.206±0.00 N/A 0.578±0.00 0.681±0.23 0.060±0.00 1.275±0.00 N/A 0.583±0.18 0.113±0.00 0.299±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000253 ENSMUST00000000260 14.870±5.37 13.779±3.53 43.864±6.07 11.939±9.04 13.074±10.18 16.950±1.49 66.865±7.38 59.606±1.85 62.369±78.05 11.579±1.20 91.939±6.47 21.629±7.47 10.112±5.00 2.635±0.96
ENSMUST00000128873 N/A N/A N/A 34.632±0.00 N/A N/A N/A N/A 0.289±0.00 N/A N/A 16.735±7.52 6.292±0.65 5.227±0.00
ENSMUST00000129176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046876 ENSMUST00000091628 3.477±0.97 0.969±0.00 5.799±2.32 2.500±0.30 1.905±0.74 3.128±0.36 1.377±0.33 2.526±0.82 1.146±0.70 4.227±1.52 1.760±0.57 2.521±1.49 0.722±0.76 0.517±0.31
ENSMUST00000167708 3.263±1.78 7.118±0.92 2.431±0.00 1.308±0.26 3.924±1.82 5.315±1.52 1.097±0.26 4.680±0.67 1.252±0.82 3.767±1.96 1.609±0.82 5.315±2.19 0.535±0.21 0.426±0.25
ENSMUST00000180110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.651±0.00 1.434±0.00 N/A N/A

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