C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIF, polypeptide 1, 74kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593678 GTF2F1-006 ENSG00000125651 9606 - 19:6379878-6391952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000593678
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000593678 6.067±0.00 15.802±0.00 12.051±9.90 10.504±0.00 14.488±13.97 4.242±0.00 10.270±0.00 6.731±0.00 2.441±2.17 4.611±3.73 29.929±8.02 9.205±3.19 22.429±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WG CIL_0003WG_0001 CGP 19:6375148-6393981
CIL_0003WB CIL_0003WB_0001 CGP 19:6379569-6424794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003824 IEA catalytic activity
GO:0005634 IEA nucleus
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0032968 IEA positive regulation of transcription elongation from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002733 Gtf2f1-201 protein_coding Mus_musculus 0 856

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