C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13038
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119886 Gm13038-001 ENSMUSG00000081838 10090 + 4:143152572-143153030 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119886
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119886 0.792±0.40 1.257±0.24 0.289±0.00 0.824±0.00 1.841±0.54 1.045±0.27 0.460±0.06 0.750±0.32 0.536±0.30 1.173±0.34 1.282±0.69 0.551±0.08 0.580±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WT CIL_0003WT_0002 CGP 4:142102390-143212995

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 407
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 350
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 383
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 0 361
ENST00000525981 RPL27A-010 protein_coding Homo_sapiens 1e-31 139
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 322
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 401
ENST00000530913 RPL27A-011 protein_coding Homo_sapiens 0 322
ENST00000531978 RPL27A-004 protein_coding Homo_sapiens 0 272
ENST00000532359 RPL27A-006 protein_coding Homo_sapiens 0 198
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 0 361

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