C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366455 AC007618.3-001 ENSG00000203648 9606 + 12:2659937-2660969 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMusclePlacentaTestisENST00000366455
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Placenta Testis
ENST00000366455 0.018±0.00 0.083±0.07 0.106±0.00 0.182±0.03 0.094±0.05 0.206±0.00 0.016±0.00 0.031±0.00 0.087±0.00 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XH CIL_0003XH_0002 CGP 12:1946054-2697950

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074205 Rps6-ps1-201 processed_pseudogene Mus_musculus 0 383
ENSMUST00000100510 Gm16409-201 processed_pseudogene Mus_musculus 0 366
ENSMUST00000121853 Gm11263-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000079841 Rps6-ps2-201 processed_pseudogene Mus_musculus 0 361
ENSMUST00000120762 Gm8172-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000118499 Rps6-ps4-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000102814 Rps6-001 protein_coding Mus_musculus 0 350
ENSMUST00000118010 Rps6-ps3-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000121487 Gm11604-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000118824 Gm12242-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000122061 Gm14138-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000118747 Gm15233-001 processed_pseudogene Mus_musculus 6e-29 132
ENSMUST00000118255 Gm14172-001 processed_pseudogene Mus_musculus 6e-24 115
ENSMUST00000117178 Gm14481-001 processed_pseudogene Mus_musculus 8e-18 95

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