C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164902-ENSG00000196900 CGP 9606 5:126600268-126636287
GeneTranscriptPositionBiotype
ENSG00000164902 (PHAX)
phosphorylated adaptor for RNA export 		ENST00000297540 (PHAX-001) 126600268-126627252 protein_coding
ENST00000505674 (PHAX-004) 126603561-126617333 retained_intron
ENST00000511371 (PHAX-007) 126608357-126625209 retained_intron
ENST00000513813 (PHAX-005) 126617235-126625478 retained_intron
ENST00000514725 (PHAX-006) 126600925-126604064 processed_transcript
ENSG00000196900 (TEX43)
testis expressed 43 		ENST00000357147 (TEX43-001) 126631722-126636287 protein_coding
ENST00000506701 (TEX43-002) 126632534-126636242 retained_intron
ENSG00000230929 (RP11-395C3.1)
 ENST00000490423 (RP11-395C3.1-001) 126628019-126628319 processed_pseudogene
CIL_00041P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000008301-ENSMUSG00000032900 CGP 10090 18:56562443-56594782
GeneTranscriptPositionBiotype
ENSMUSG00000008301 (Phax)
phosphorylated adaptor for RNA export 		ENSMUST00000008445 (Phax-001) 56572822-56587712 protein_coding
ENSMUST00000130163 (Phax-002) 56562443-56587189 protein_coding
ENSMUST00000132628 (Phax-003) 56562593-56580300 protein_coding
ENSMUSG00000032900 (Tex43)
testis expressed 43 		ENSMUST00000035640 (Tex43-001) 56588350-56594782 protein_coding
ENSMUST00000127591 (Tex43-002) 56588379-56592714 protein_coding
ENSMUST00000147775 (Tex43-004) 56588426-56594782 protein_coding
ENSMUST00000153248 (Tex43-003) 56588389-56594712 nonsense_mediated_decay
ENSMUSG00000053644 (Aldh7a1)
aldehyde dehydrogenase family 7, member A1 		ENSMUST00000066208 (Aldh7a1-002) 56526744-56562309 protein_coding
ENSMUST00000168517 (Aldh7a1-004) 56532539-56537617 retained_intron
ENSMUST00000170309 (Aldh7a1-006) 56537248-56562226 protein_coding
ENSMUST00000171844 (Aldh7a1-005) 56550367-56562197 protein_coding
ENSMUST00000171851 (Aldh7a1-003) 56546920-56559422 retained_intron
ENSMUST00000172734 (Aldh7a1-007) 56526605-56562328 protein_coding
ENSMUST00000172902 (Aldh7a1-009) 56509687-56526849 processed_transcript
ENSMUST00000174518 (Aldh7a1-001) 56524722-56572951 protein_coding
ENSMUST00000174704 (Aldh7a1-008) 56526750-56562218 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041P_0001ENSG00000164902ENST00000297540ENST00000505674ENST00000511371ENST00000513813ENST00000514725ENSG00000196900ENST00000357147ENST00000506701ENSG00000230929ENST00000490423CIL_00041P_0002ENSMUSG00000008301ENSMUST00000008445ENSMUST00000130163ENSMUST00000132628ENSMUSG00000032900ENSMUST00000035640ENSMUST00000127591ENSMUST00000147775ENSMUST00000153248ENSMUSG00000053644ENSMUST00000066208ENSMUST00000168517ENSMUST00000170309ENSMUST00000171844ENSMUST00000171851ENSMUST00000172734ENSMUST00000172902ENSMUST00000174518ENSMUST00000174704
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041P_0001ENSG00000164902ENST00000297540ENST00000505674ENST00000511371ENST00000513813ENST00000514725ENSG00000196900ENST00000357147ENST00000506701ENSG00000230929ENST00000490423CIL_00041P_0002ENSMUSG00000008301ENSMUST00000008445ENSMUST00000130163ENSMUST00000132628ENSMUSG00000032900ENSMUST00000035640ENSMUST00000127591ENSMUST00000147775ENSMUSG00000053644ENSMUST00000066208ENSMUST00000174518ENSMUST00000174704
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164902 ENST00000297540 2.730±0.00 3.739±0.00 0.490±0.00 2.938±0.83 2.531±1.41 2.294±1.56 1.717±1.21 2.975±1.83 2.209±0.46 1.085±0.23 2.026±0.00 3.248±2.25 2.604±0.36 3.657±1.57
ENST00000505674 5.364±0.00 4.703±0.00 1.829±0.00 9.419±1.10 5.628±2.67 6.045±0.87 2.093±0.89 5.041±1.71 3.986±0.78 3.142±0.00 1.793±0.79 3.830±1.24 6.872±4.53 9.224±3.24
ENST00000511371 3.812±0.00 2.747±0.00 3.500±0.00 5.393±0.79 1.986±0.00 4.984±0.79 1.182±0.44 2.760±0.00 2.189±0.00 2.397±1.27 1.669±0.00 4.529±3.20 N/A 6.392±0.08
ENST00000513813 N/A N/A N/A N/A N/A N/A N/A 2.621±0.00 N/A N/A N/A 1.723±0.45 4.130±1.87 N/A
ENST00000514725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.260±0.00 N/A N/A N/A
ENSG00000196900 ENST00000357147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.441±1.64
ENST00000506701 N/A 0.202±0.00 N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.158±0.00
ENSG00000230929 ENST00000490423 0.120±0.00 0.187±0.00 N/A 0.201±0.00 5.103±0.00 2.895±2.42 0.284±0.00 N/A 0.547±0.00 0.467±0.00 N/A 1.338±0.00 N/A 0.189±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008301 ENSMUST00000008445 7.814±1.92 7.376±0.34 12.972±0.56 23.548±1.83 5.583±0.39 5.077±1.03 3.533±0.34 N/A 10.881±1.54 6.944±0.47 3.472±0.50 11.080±4.29 20.065±4.43 3.792±0.25
ENSMUST00000130163 N/A N/A N/A 24.035±0.00 N/A N/A N/A N/A N/A N/A 4.240±0.72 19.709±7.22 34.961±17.61 8.198±0.00
ENSMUST00000132628 N/A N/A N/A 64.525±0.00 N/A N/A N/A N/A N/A N/A N/A 83.523±0.00 75.858±3.98 18.774±0.00
ENSMUSG00000032900 ENSMUST00000035640 N/A N/A N/A 0.048±0.03 N/A N/A 0.091±0.00 N/A 0.015±0.00 N/A N/A N/A 0.076±0.06 95.872±37.69
ENSMUST00000127591 N/A N/A N/A 0.097±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.03 N/A
ENSMUST00000147775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.371±0.00 25.237±0.31
ENSMUST00000153248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053644 ENSMUST00000066208 34.251±9.01 20.978±3.58 28.125±0.18 15.890±1.33 18.663±1.87 7.573±1.09 10.628±0.55 181.070±7.98 124.568±69.95 18.298±0.87 10.865±1.34 38.264±9.86 94.620±69.54 16.569±1.71
ENSMUST00000168517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174518 3.012±0.74 N/A 3.299±0.06 3.142±0.60 2.147±0.37 1.151±0.04 1.284±0.17 N/A N/A 2.462±0.56 1.189±0.12 4.151±0.77 N/A 2.079±0.35
ENSMUST00000174704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.380±0.00 24.989±6.79 5.300±0.00

Loading