C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490423 RP11-395C3.1-001 ENSG00000230929 9606 - 5:126628019-126628319 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryTestisENST00000490423
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000490423 0.120±0.00 0.187±0.00 0.201±0.00 5.103±0.00 2.895±2.42 0.284±0.00 0.547±0.00 0.467±0.00 1.338±0.00 0.189±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041P CIL_00041P_0001 CGP 5:126600268-126636287

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180255 Gm11942-001 processed_pseudogene Mus_musculus 0 187
ENSMUST00000073722 Gm10073-201 protein_coding Mus_musculus 0 187
ENSMUST00000008036 Rplp1-201 protein_coding Mus_musculus 0 187
ENSMUST00000117496 Gm13035-001 processed_pseudogene Mus_musculus 1e-37 159
ENSMUST00000177803 Gm13249-001 processed_pseudogene Mus_musculus 6e-35 150
ENSMUST00000122071 Gm13149-001 processed_pseudogene Mus_musculus 2e-34 148
ENSMUST00000118238 Gm13229-001 processed_pseudogene Mus_musculus 1e-31 139
ENSMUST00000119875 Gm13163-001 processed_pseudogene Mus_musculus 1e-31 139
ENSMUST00000119646 Gm13245-001 processed_pseudogene Mus_musculus 3e-28 128
ENSMUST00000120994 Gm13246-001 processed_pseudogene Mus_musculus 1e-26 122

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