C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101049-ENSG00000101052 CGP 9606 20:43558968-43647296
GeneTranscriptPositionBiotype
ENSG00000101049 (SGK2)
serum/glucocorticoid regulated kinase 2 		ENST00000341458 (SGK2-002) 43565763-43585677 protein_coding
ENST00000373077 (SGK2-010) 43559027-43585300 nonsense_mediated_decay
ENST00000373092 (SGK2-001) 43559042-43585677 protein_coding
ENST00000373100 (SGK2-005) 43558968-43585677 protein_coding
ENST00000412111 (SGK2-007) 43565228-43572137 protein_coding
ENST00000423407 (SGK2-201) 43565115-43585632 protein_coding
ENST00000426287 (SGK2-011) 43566316-43585016 protein_coding
ENST00000485914 (SGK2-003) 43569469-43570996 processed_transcript
ENST00000496343 (SGK2-004) 43559042-43588237 nonsense_mediated_decay
ENST00000617268 (SGK2-009) 43564786-43566525 protein_coding
ENST00000617358 (SGK2-008) 43565185-43569643 retained_intron
ENSG00000101052 (IFT52)
intraflagellar transport 52 		ENST00000373030 (IFT52-001) 43590931-43647296 protein_coding
ENST00000373039 (IFT52-002) 43590990-43647222 protein_coding
ENST00000460014 (IFT52-005) 43613966-43621058 processed_transcript
ENST00000461012 (IFT52-006) 43637147-43647227 processed_transcript
ENST00000467024 (IFT52-004) 43613850-43624122 processed_transcript
ENST00000468420 (IFT52-003) 43613899-43637204 processed_transcript
ENST00000471199 (IFT52-007) 43642158-43647217 processed_transcript
ENST00000476986 (IFT52-008) 43603874-43605216 processed_transcript
ENST00000486243 (IFT52-009) 43594722-43605073 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00044M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017868-ENSMUSG00000017858 CGP 10090 2:162987330-163046141
GeneTranscriptPositionBiotype
ENSMUSG00000017858 (Ift52)
intraflagellar transport 52 		ENSMUST00000018002 (Ift52-001) 163017354-163046141 protein_coding
ENSMUST00000125144 (Ift52-004) 163017519-163023541 processed_transcript
ENSMUST00000150396 (Ift52-002) 163017491-163031270 protein_coding
ENSMUST00000152201 (Ift52-003) 163022443-163028429 processed_transcript
ENSMUSG00000017868 (Sgk2)
serum/glucocorticoid regulated kinase 2 		ENSMUST00000018012 (Sgk2-001) 162987330-163014127 protein_coding
ENSMUST00000117123 (Sgk2-003) 162987502-163014126 protein_coding
ENSMUST00000139053 (Sgk2-002) 162998112-163006833 retained_intron

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044M_0001ENSG00000101049ENST00000341458ENST00000373077ENST00000373092ENST00000373100ENST00000412111ENST00000423407ENST00000426287ENST00000485914ENST00000496343ENST00000617268ENST00000617358ENSG00000101052ENST00000373030ENST00000373039ENST00000460014ENST00000461012ENST00000467024ENST00000468420ENST00000471199ENST00000476986ENST00000486243CIL_00044M_0002ENSMUSG00000017858ENSMUST00000018002ENSMUST00000125144ENSMUST00000150396ENSMUST00000152201ENSMUSG00000017868ENSMUST00000018012ENSMUST00000117123ENSMUST00000139053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044M_0001ENSG00000101049ENST00000341458ENST00000373077ENST00000373092ENST00000423407ENST00000496343ENSG00000101052ENST00000373030ENST00000373039ENST00000460014ENST00000467024ENST00000468420ENST00000471199ENST00000476986CIL_00044M_0002ENSMUSG00000017858ENSMUST00000018002ENSMUST00000150396ENSMUSG00000017868ENSMUST00000018012ENSMUST00000117123ENSMUST00000139053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101049 ENST00000341458 N/A N/A N/A N/A N/A N/A N/A N/A 0.384±0.00 N/A N/A 1.754±0.00 N/A N/A
ENST00000373077 N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A 5.553±0.00 N/A N/A
ENST00000373092 N/A N/A N/A N/A 12.424±0.00 N/A N/A N/A N/A N/A N/A N/A 0.484±0.02 N/A
ENST00000373100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423407 N/A N/A N/A 4.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496343 N/A N/A N/A 2.972±0.00 5.592±0.00 0.651±0.00 N/A 8.980±7.32 15.265±0.00 N/A 0.256±0.00 N/A N/A N/A
ENST00000617268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101052 ENST00000373030 4.137±0.00 3.396±0.00 N/A 1.491±0.44 N/A 0.431±0.00 1.086±0.00 1.818±0.00 0.808±0.00 N/A N/A 5.207±1.66 1.719±0.08 4.022±1.14
ENST00000373039 8.454±0.00 8.220±0.00 N/A 3.347±2.83 10.116±0.00 2.716±2.38 0.657±0.59 3.860±3.21 1.099±0.29 2.935±2.32 1.462±0.00 10.802±8.45 8.014±2.65 14.760±7.03
ENST00000460014 N/A N/A 2.783±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467024 N/A N/A N/A 1.620±0.00 N/A N/A N/A N/A 0.935±0.00 N/A N/A 6.365±0.00 N/A N/A
ENST00000468420 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.228±0.00 N/A N/A N/A 9.110±0.00
ENST00000471199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A
ENST00000476986 N/A N/A N/A N/A N/A 3.276±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017858 ENSMUST00000018002 14.066±1.79 20.429±8.18 17.626±2.35 9.446±3.57 12.712±3.42 12.471±1.81 7.192±1.54 18.146±1.74 9.560±2.16 13.213±2.06 5.189±0.55 16.054±5.00 8.409±2.94 15.450±6.57
ENSMUST00000125144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.666±0.00 N/A 5.898±0.00 8.228±0.00
ENSMUST00000152201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000017868 ENSMUST00000018012 0.015±0.00 0.161±0.07 0.109±0.01 0.031±0.01 0.055±0.03 13.083±3.87 0.020±0.01 47.061±4.94 10.750±8.67 0.068±0.04 N/A 0.033±0.01 13.366±11.68 0.121±0.04
ENSMUST00000117123 N/A 0.055±0.00 N/A N/A 0.078±0.04 N/A N/A N/A 0.160±0.00 N/A N/A 0.045±0.02 1.309±0.68 0.126±0.00
ENSMUST00000139053 N/A 0.529±0.19 N/A N/A 0.172±0.06 N/A N/A N/A N/A 0.120±0.00 N/A 0.560±0.00 N/A N/A

Loading