C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101049-ENSG00000101052 CGP 9606 20:43558968-43647296
GeneTranscriptPositionBiotype
ENSG00000101049 (SGK2)
serum/glucocorticoid regulated kinase 2 		ENST00000341458 (SGK2-002) 43565763-43585677 protein_coding
ENST00000373077 (SGK2-010) 43559027-43585300 nonsense_mediated_decay
ENST00000373092 (SGK2-001) 43559042-43585677 protein_coding
ENST00000373100 (SGK2-005) 43558968-43585677 protein_coding
ENST00000412111 (SGK2-007) 43565228-43572137 protein_coding
ENST00000423407 (SGK2-201) 43565115-43585632 protein_coding
ENST00000426287 (SGK2-011) 43566316-43585016 protein_coding
ENST00000485914 (SGK2-003) 43569469-43570996 processed_transcript
ENST00000496343 (SGK2-004) 43559042-43588237 nonsense_mediated_decay
ENST00000617268 (SGK2-009) 43564786-43566525 protein_coding
ENST00000617358 (SGK2-008) 43565185-43569643 retained_intron
ENSG00000101052 (IFT52)
intraflagellar transport 52 		ENST00000373030 (IFT52-001) 43590931-43647296 protein_coding
ENST00000373039 (IFT52-002) 43590990-43647222 protein_coding
ENST00000460014 (IFT52-005) 43613966-43621058 processed_transcript
ENST00000461012 (IFT52-006) 43637147-43647227 processed_transcript
ENST00000467024 (IFT52-004) 43613850-43624122 processed_transcript
ENST00000468420 (IFT52-003) 43613899-43637204 processed_transcript
ENST00000471199 (IFT52-007) 43642158-43647217 processed_transcript
ENST00000476986 (IFT52-008) 43603874-43605216 processed_transcript
ENST00000486243 (IFT52-009) 43594722-43605073 processed_transcript
CIL_00044M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017868-ENSMUSG00000017858 CGP 10090 2:162987330-163046141
GeneTranscriptPositionBiotype
ENSMUSG00000017858 (Ift52)
intraflagellar transport 52 		ENSMUST00000018002 (Ift52-001) 163017354-163046141 protein_coding
ENSMUST00000125144 (Ift52-004) 163017519-163023541 processed_transcript
ENSMUST00000150396 (Ift52-002) 163017491-163031270 protein_coding
ENSMUST00000152201 (Ift52-003) 163022443-163028429 processed_transcript
ENSMUSG00000017868 (Sgk2)
serum/glucocorticoid regulated kinase 2 		ENSMUST00000018012 (Sgk2-001) 162987330-163014127 protein_coding
ENSMUST00000117123 (Sgk2-003) 162987502-163014126 protein_coding
ENSMUST00000139053 (Sgk2-002) 162998112-163006833 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044M_0001ENSG00000101049ENST00000341458ENST00000373077ENST00000373092ENST00000373100ENST00000412111ENST00000423407ENST00000426287ENST00000485914ENST00000496343ENST00000617268ENST00000617358ENSG00000101052ENST00000373030ENST00000373039ENST00000460014ENST00000461012ENST00000467024ENST00000468420ENST00000471199ENST00000476986ENST00000486243CIL_00044M_0002ENSMUSG00000017858ENSMUST00000018002ENSMUST00000125144ENSMUST00000150396ENSMUST00000152201ENSMUSG00000017868ENSMUST00000018012ENSMUST00000117123ENSMUST00000139053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044M_0001ENSG00000101049ENST00000341458ENST00000373077ENST00000373092ENST00000423407ENST00000496343ENSG00000101052ENST00000373030ENST00000373039ENST00000460014ENST00000467024ENST00000468420ENST00000471199ENST00000476986CIL_00044M_0002ENSMUSG00000017858ENSMUST00000018002ENSMUST00000150396ENSMUSG00000017868ENSMUST00000018012ENSMUST00000117123ENSMUST00000139053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101049 ENST00000341458 N/A N/A N/A N/A N/A N/A N/A N/A 0.384±0.00 N/A N/A 1.754±0.00 N/A N/A
ENST00000373077 N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A 5.553±0.00 N/A N/A
ENST00000373092 N/A N/A N/A N/A 12.424±0.00 N/A N/A N/A N/A N/A N/A N/A 0.484±0.02 N/A
ENST00000373100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423407 N/A N/A N/A 4.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496343 N/A N/A N/A 2.972±0.00 5.592±0.00 0.651±0.00 N/A 8.980±7.32 15.265±0.00 N/A 0.256±0.00 N/A N/A N/A
ENST00000617268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101052 ENST00000373030 4.137±0.00 3.396±0.00 N/A 1.491±0.44 N/A 0.431±0.00 1.086±0.00 1.818±0.00 0.808±0.00 N/A N/A 5.207±1.66 1.719±0.08 4.022±1.14
ENST00000373039 8.454±0.00 8.220±0.00 N/A 3.347±2.83 10.116±0.00 2.716±2.38 0.657±0.59 3.860±3.21 1.099±0.29 2.935±2.32 1.462±0.00 10.802±8.45 8.014±2.65 14.760±7.03
ENST00000460014 N/A N/A 2.783±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467024 N/A N/A N/A 1.620±0.00 N/A N/A N/A N/A 0.935±0.00 N/A N/A 6.365±0.00 N/A N/A
ENST00000468420 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.228±0.00 N/A N/A N/A 9.110±0.00
ENST00000471199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A
ENST00000476986 N/A N/A N/A N/A N/A 3.276±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017858 ENSMUST00000018002 14.066±1.79 20.429±8.18 17.626±2.35 9.446±3.57 12.712±3.42 12.471±1.81 7.192±1.54 18.146±1.74 9.560±2.16 13.213±2.06 5.189±0.55 16.054±5.00 8.409±2.94 15.450±6.57
ENSMUST00000125144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.666±0.00 N/A 5.898±0.00 8.228±0.00
ENSMUST00000152201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000017868 ENSMUST00000018012 0.015±0.00 0.161±0.07 0.109±0.01 0.031±0.01 0.055±0.03 13.083±3.87 0.020±0.01 47.061±4.94 10.750±8.67 0.068±0.04 N/A 0.033±0.01 13.366±11.68 0.121±0.04
ENSMUST00000117123 N/A 0.055±0.00 N/A N/A 0.078±0.04 N/A N/A N/A 0.160±0.00 N/A N/A 0.045±0.02 1.309±0.68 0.126±0.00
ENSMUST00000139053 N/A 0.529±0.19 N/A N/A 0.172±0.06 N/A N/A N/A N/A 0.120±0.00 N/A 0.560±0.00 N/A N/A

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