C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076348-ENSDARG00000002506 CGP 7955 7:44551781-44610814
GeneTranscriptPositionBiotype
ENSDARG00000002506 (C7H16orf87)
chromosome 16 open reading frame 87 		ENSDART00000018972 (C7H16orf87-201) 44602709-44610814 protein_coding
ENSDARG00000076348 (mylk3)
myosin light chain kinase 3 		ENSDART00000109918 (mylk3-201) 44551781-44587916 protein_coding
ENSDART00000142981 (mylk3-001) 44551955-44587973 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00044Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140795-ENSG00000155330 CGP 9606 16:46706979-46831411
GeneTranscriptPositionBiotype
ENSG00000140795 (MYLK3)
myosin light chain kinase 3 		ENST00000394809 (MYLK3-001) 46706979-46748309 protein_coding
ENST00000536476 (MYLK3-003) 46707666-46763246 protein_coding
ENST00000562104 (MYLK3-006) 46707692-46711790 processed_transcript
ENST00000564731 (MYLK3-002) 46725776-46738137 retained_intron
ENST00000565182 (MYLK3-007) 46707668-46710987 retained_intron
ENST00000569810 (MYLK3-004) 46738038-46790407 processed_transcript
ENST00000569844 (MYLK3-005) 46727238-46729937 retained_intron
ENSG00000155330 (C16orf87)
chromosome 16 open reading frame 87 		ENST00000285697 (C16orf87-001) 46802094-46831411 protein_coding
ENST00000394806 (C16orf87-002) 46796607-46831162 protein_coding
ENST00000564250 (C16orf87-004) 46803003-46830759 processed_transcript
ENST00000565112 (C16orf87-003) 46802718-46831068 protein_coding
ENSG00000260782 (RP11-480G7.2)
 ENST00000566331 (RP11-480G7.2-001) 46789898-46792040 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00044Z_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031698-ENSMUSG00000036934 CGP 10090 8:85324303-85432841
GeneTranscriptPositionBiotype
ENSMUSG00000031698 (Mylk3)
myosin light chain kinase 3 		ENSMUST00000034133 (Mylk3-001) 85324303-85365324 protein_coding
ENSMUST00000121972 (Mylk3-002) 85327053-85365347 protein_coding
ENSMUST00000122452 (Mylk3-003) 85324447-85380978 protein_coding
ENSMUST00000137290 (Mylk3-005) 85359248-85386345 protein_coding
ENSMUST00000138825 (Mylk3-004) 85360425-85381034 retained_intron
ENSMUSG00000036934 (4921524J17Rik)
RIKEN cDNA 4921524J17 gene 		ENSMUST00000047749 (4921524J17Rik-201) 85408759-85432841 protein_coding
ENSMUSG00000084895 (AA672651)
expressed sequence AA672651 		ENSMUST00000151550 (AA672651-001) 85339343-85340272 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044Z_0001ENSDARG00000002506ENSDART00000018972ENSDARG00000076348ENSDART00000109918ENSDART00000142981CIL_00044Z_0002ENSG00000140795ENST00000394809ENST00000536476ENST00000562104ENST00000564731ENST00000565182ENST00000569810ENST00000569844ENSG00000155330ENST00000285697ENST00000394806ENST00000564250ENST00000565112ENSG00000260782ENST00000566331CIL_00044Z_0003ENSMUSG00000031698ENSMUST00000034133ENSMUST00000121972ENSMUST00000122452ENSMUST00000137290ENSMUST00000138825ENSMUSG00000036934ENSMUST00000047749ENSMUSG00000084895ENSMUST00000151550
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044Z_0001ENSDARG00000002506ENSDART00000018972ENSDARG00000076348ENSDART00000109918ENSDART00000142981CIL_00044Z_0002ENSG00000140795ENST00000394809ENST00000536476ENST00000564731ENST00000569810ENST00000569844ENSG00000155330ENST00000285697ENST00000394806ENSG00000260782ENST00000566331CIL_00044Z_0003ENSMUSG00000031698ENSMUST00000034133ENSMUST00000121972ENSMUST00000122452ENSMUST00000137290ENSMUST00000138825ENSMUSG00000036934ENSMUST00000047749ENSMUSG00000084895ENSMUST00000151550
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002506 ENSDART00000018972 N/A N/A N/A 31.583±2.33 N/A N/A 37.585±15.28 33.580±8.45 0.285±0.00 N/A 13.901±0.00 N/A N/A N/A
ENSDARG00000076348 ENSDART00000109918 N/A N/A N/A 0.325±0.00 N/A N/A 43.989±0.00 0.134±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000142981 N/A N/A N/A 0.107±0.06 N/A N/A N/A 0.131±0.00 0.042±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140795 ENST00000394809 N/A N/A N/A N/A N/A N/A 20.781±0.00 N/A N/A N/A N/A 0.099±0.01 0.211±0.20 0.335±0.00
ENST00000536476 N/A N/A 0.849±0.00 0.082±0.00 N/A 0.021±0.00 26.408±0.00 N/A N/A 0.055±0.00 8.496±6.57 N/A 0.045±0.00 N/A
ENST00000562104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564731 0.565±0.00 N/A N/A 0.825±0.00 0.365±0.32 0.715±0.00 N/A 0.226±0.00 0.097±0.00 0.375±0.00 N/A 0.316±0.23 0.027±0.00 1.528±0.71
ENST00000565182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A
ENST00000569844 N/A N/A N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155330 ENST00000285697 0.943±0.00 1.818±0.00 0.860±0.00 2.154±0.00 1.673±0.73 1.279±0.73 1.398±0.77 3.263±1.39 1.957±0.89 1.705±0.18 0.615±0.00 1.302±0.49 2.538±0.42 11.541±2.14
ENST00000394806 0.156±0.00 N/A N/A N/A N/A 0.352±0.00 0.232±0.05 0.519±0.17 0.419±0.13 0.348±0.03 N/A 0.261±0.02 0.332±0.02 0.938±0.00
ENST00000564250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260782 ENST00000566331 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031698 ENSMUST00000034133 0.068±0.00 N/A N/A 0.006±0.00 0.052±0.03 N/A 43.965±13.27 0.084±0.02 2.147±0.84 0.667±0.15 0.080±0.00 N/A 0.904±0.71 0.040±0.00
ENSMUST00000121972 N/A N/A N/A 0.029±0.00 0.184±0.06 0.091±0.03 31.216±11.49 0.117±0.00 0.111±0.05 0.681±0.00 0.065±0.00 0.330±0.16 0.231±0.00 0.373±0.00
ENSMUST00000122452 0.070±0.03 0.116±0.04 0.064±0.01 0.023±0.01 0.064±0.03 0.052±0.02 27.810±0.00 0.306±0.10 9.438±6.26 1.023±0.16 0.061±0.04 0.485±0.21 1.026±0.57 0.278±0.18
ENSMUST00000137290 N/A N/A N/A 1.011±0.00 N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A
ENSMUST00000138825 N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.01 N/A N/A 1.806±0.62 N/A N/A
ENSMUSG00000036934 ENSMUST00000047749 4.448±0.98 10.855±1.13 3.444±0.73 2.067±1.23 3.687±0.72 4.288±0.68 5.348±0.80 4.549±0.32 5.353±1.62 6.014±0.94 4.742±0.55 10.210±4.07 7.516±4.40 6.582±2.94
ENSMUSG00000084895 ENSMUST00000151550 N/A N/A N/A N/A N/A N/A 5.591±1.75 N/A 0.282±0.24 0.380±0.16 N/A 0.590±0.00 0.027±0.00 N/A

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