C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000459_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164743-ENSG00000185053 CGP 9606 8:13566843-15238339
GeneTranscriptPositionBiotype
ENSG00000164743 (C8orf48)
chromosome 8 open reading frame 48 		ENST00000297324 (C8orf48-001) 13566843-13568287 protein_coding
ENSG00000185053 (SGCZ)
sarcoglycan, zeta 		ENST00000382080 (SGCZ-001) 14089864-15238339 protein_coding
ENST00000421524 (SGCZ-002) 14090374-14554926 protein_coding
ENST00000613692 (SGCZ-201) 14089865-14324209 protein_coding
ENSG00000214366 (RP11-138H14.1)
 ENST00000528228 (RP11-138H14.1-001) 14309033-14309672 processed_pseudogene
ENSG00000254491 (RP11-145O15.2)
 ENST00000530718 (RP11-145O15.2-001) 13583889-13584533 processed_pseudogene
ENSG00000254753 (RP11-480O10.1)
 ENST00000525673 (RP11-480O10.1-001) 13844101-13849109 lincRNA
ENSG00000255069 (RP11-145O15.3)
 ENST00000529018 (RP11-145O15.3-001) 13557657-13604610 antisense
ENSG00000255076 (CTD-2023J5.1)
 ENST00000532973 (CTD-2023J5.1-001) 14879057-14879819 sense_intronic
ENSG00000255413 (RP11-436P7.2)
 ENST00000534017 (RP11-436P7.2-001) 13741809-13742781 processed_pseudogene
ENSG00000255437 (RP11-510I21.1)
 ENST00000534576 (RP11-510I21.1-001) 14022687-14023422 processed_pseudogene
ENSG00000255457 (RP11-436P7.1)
 ENST00000532664 (RP11-436P7.1-001) 13695574-13705506 processed_pseudogene
ENSG00000263415 (AC021760.1)
 ENST00000580600 (AC021760.1-201) 14514741-14514865 miRNA
CIL_000459_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074384-ENSMUSG00000039539 CGP 10090 8:36993575-38661508
GeneTranscriptPositionBiotype
ENSMUSG00000039539 (Sgcz)
sarcoglycan zeta 		ENSMUST00000118896 (Sgcz-001) 37522554-38661508 protein_coding
ENSMUST00000135764 (Sgcz-002) 37522298-38661508 nonsense_mediated_decay
ENSMUSG00000074384 (AI429214)
expressed sequence AI429214 		ENSMUST00000098825 (AI429214-201) 36993575-36995531 protein_coding
ENSMUSG00000081316 (Gm16205)
predicted gene 16205 		ENSMUST00000117720 (Gm16205-001) 37787666-37788692 processed_pseudogene
ENSMUSG00000081517 (Gm16204)
predicted gene 16204 		ENSMUST00000117864 (Gm16204-001) 38076714-38079639 processed_pseudogene
ENSMUSG00000083125 (Gm16203)
predicted gene 16203 		ENSMUST00000120023 (Gm16203-001) 38288852-38289347 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000459_0001ENSG00000164743ENST00000297324ENSG00000185053ENST00000382080ENST00000421524ENST00000613692ENSG00000214366ENST00000528228ENSG00000254491ENST00000530718ENSG00000254753ENST00000525673ENSG00000255069ENST00000529018ENSG00000255076ENST00000532973ENSG00000255413ENST00000534017ENSG00000255437ENST00000534576ENSG00000255457ENST00000532664ENSG00000263415ENST00000580600CIL_000459_0002ENSMUSG00000039539ENSMUST00000118896ENSMUST00000135764ENSMUSG00000074384ENSMUST00000098825ENSMUSG00000081316ENSMUST00000117720ENSMUSG00000081517ENSMUST00000117864ENSMUSG00000083125ENSMUST00000120023
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000459_0001ENSG00000164743ENST00000297324ENSG00000185053ENST00000382080ENST00000421524ENST00000613692ENSG00000214366ENST00000528228ENSG00000254491ENST00000530718ENSG00000254753ENST00000525673ENSG00000255069ENST00000529018ENSG00000255076ENST00000532973ENSG00000255413ENST00000534017ENSG00000255437ENST00000534576ENSG00000255457ENST00000532664ENSG00000263415ENST00000580600CIL_000459_0002ENSMUSG00000039539ENSMUST00000118896ENSMUSG00000074384ENSMUST00000098825ENSMUSG00000081316ENSMUST00000117720ENSMUSG00000081517ENSMUST00000117864ENSMUSG00000083125ENSMUST00000120023
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164743 ENST00000297324 0.230±0.00 0.369±0.00 0.144±0.00 0.921±0.00 0.194±0.12 0.149±0.00 0.101±0.00 0.026±0.00 0.162±0.00 0.114±0.00 0.078±0.00 0.457±0.21 0.164±0.01 7.045±0.00
ENSG00000185053 ENST00000382080 N/A 0.011±0.00 N/A N/A 0.021±0.00 N/A N/A N/A 0.108±0.10 N/A N/A 0.102±0.00 N/A 0.123±0.03
ENST00000421524 N/A N/A N/A 0.147±0.00 N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613692 N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A 0.050±0.00 N/A N/A N/A N/A
ENSG00000214366 ENST00000528228 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A 0.053±0.00 N/A N/A 0.018±0.00
ENSG00000254491 ENST00000530718 N/A N/A N/A 0.084±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254753 ENST00000525673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.24
ENSG00000255069 ENST00000529018 0.006±0.00 0.005±0.00 N/A 0.033±0.00 0.179±0.00 0.051±0.00 0.010±0.00 N/A N/A N/A N/A 0.012±0.00 N/A 0.040±0.00
ENSG00000255076 ENST00000532973 N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 0.043±0.00 N/A N/A N/A N/A N/A
ENSG00000255413 ENST00000534017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.02
ENSG00000255437 ENST00000534576 N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 0.016±0.00
ENSG00000255457 ENST00000532664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.742±0.44
ENSG00000263415 ENST00000580600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039539 ENSMUST00000118896 N/A N/A 0.099±0.03 0.336±0.10 0.042±0.00 N/A N/A 0.061±0.05 0.040±0.03 N/A N/A 0.094±0.02 0.008±0.01 N/A
ENSMUST00000135764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074384 ENSMUST00000098825 1.200±0.02 0.389±0.23 1.824±0.30 1.221±0.22 0.920±0.29 0.205±0.07 0.325±0.08 0.946±0.20 0.201±0.12 1.086±0.16 0.088±0.04 1.075±0.46 1.911±0.88 10.726±1.33
ENSMUSG00000081316 ENSMUST00000117720 N/A N/A 0.017±0.00 0.045±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A
ENSMUSG00000081517 ENSMUST00000117864 N/A N/A N/A 0.044±0.00 0.050±0.00 N/A 0.028±0.01 0.029±0.01 0.010±0.01 0.029±0.00 N/A 0.159±0.12 0.004±0.00 0.027±0.00
ENSMUSG00000083125 ENSMUST00000120023 0.095±0.00 N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 0.100±0.00 0.179±0.08

Loading