C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sarcoglycan, zeta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421524 SGCZ-002 ENSG00000185053 9606 - 8:14090374-14554926 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENST00000421524
Transcript ID Brain Colon
ENST00000421524 0.147±0.00 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000459 CIL_000459_0001 CGP 8:13566843-15238339
CIL_00006V CIL_00006V_0002 CGP 8:14089864-15766649

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016012 IEA sarcoglycan complex
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118896 Sgcz-001 protein_coding Mus_musculus 0 819
ENSMUST00000135764 Sgcz-002 nonsense_mediated_decay Mus_musculus 0 575

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