C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188674-ENSG00000138413 CGP 9606 2:208165343-208266074
GeneTranscriptPositionBiotype
ENSG00000138413 (IDH1)
isocitrate dehydrogenase 1 (NADP+), soluble 		ENST00000345146 (IDH1-001) 208236227-208255133 protein_coding
ENST00000415282 (IDH1-009) 208245367-208254339 protein_coding
ENST00000415913 (IDH1-006) 208236265-208254322 protein_coding
ENST00000417583 (IDH1-008) 208248562-208255798 protein_coding
ENST00000446179 (IDH1-004) 208236232-208254458 protein_coding
ENST00000451391 (IDH1-007) 208248597-208266074 protein_coding
ENST00000462386 (IDH1-003) 208247382-208255061 retained_intron
ENST00000481557 (IDH1-010) 208251261-208255113 retained_intron
ENST00000484575 (IDH1-012) 208236742-208240315 retained_intron
ENSG00000188674 (C2orf80)
chromosome 2 open reading frame 80 		ENST00000341287 (C2orf80-001) 208165347-208190073 protein_coding
ENST00000423952 (C2orf80-006) 208171006-208187016 protein_coding
ENST00000428015 (C2orf80-005) 208165376-208183024 protein_coding
ENST00000449053 (C2orf80-003) 208182972-208189985 protein_coding
ENST00000451342 (C2orf80-007) 208165343-208181286 protein_coding
ENST00000451346 (C2orf80-002) 208165355-208190024 protein_coding
ENST00000453017 (C2orf80-004) 208165478-208187004 protein_coding
ENSG00000228111 (TPT1P2)
tumor protein, translationally-controlled 1 pseudogene 2 		ENST00000413105 (TPT1P2-001) 208214724-208222625 processed_pseudogene
CIL_00045J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044816-ENSMUSG00000025950 CGP 10090 1:65105285-65186500
GeneTranscriptPositionBiotype
ENSMUSG00000025950 (Idh1)
isocitrate dehydrogenase 1 (NADP+), soluble 		ENSMUST00000097709 (Idh1-001) 65158616-65179181 protein_coding
ENSMUST00000149310 (Idh1-002) 65168589-65175564 protein_coding
ENSMUST00000169032 (Idh1-201) 65158618-65186479 protein_coding
ENSMUST00000186222 (Idh1-006) 65171120-65186459 protein_coding
ENSMUST00000188109 (Idh1-003) 65166199-65186438 protein_coding
ENSMUST00000188876 (Idh1-004) 65166244-65186500 protein_coding
ENSMUST00000191459 (Idh1-005) 65175296-65186479 protein_coding
ENSMUSG00000044816 (D630023F18Rik)
RIKEN cDNA D630023F18 gene 		ENSMUST00000050047 (D630023F18Rik-001) 65107313-65123193 protein_coding
ENSMUST00000148020 (D630023F18Rik-002) 65105285-65123214 protein_coding
ENSMUST00000153330 (D630023F18Rik-003) 65108719-65123114 nonsense_mediated_decay
ENSMUSG00000100846 (RP23-348D4.2)
predicted gene 28845 		ENSMUST00000144760 (RP23-348D4.2-001) 65100619-65119558 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045J_0001ENSG00000138413ENST00000345146ENST00000415282ENST00000415913ENST00000417583ENST00000446179ENST00000451391ENST00000462386ENST00000481557ENST00000484575ENSG00000188674ENST00000341287ENST00000423952ENST00000428015ENST00000449053ENST00000451342ENST00000451346ENST00000453017ENSG00000228111ENST00000413105CIL_00045J_0002ENSMUSG00000025950ENSMUST00000097709ENSMUST00000149310ENSMUST00000169032ENSMUST00000186222ENSMUST00000188109ENSMUST00000188876ENSMUST00000191459ENSMUSG00000044816ENSMUST00000050047ENSMUST00000148020ENSMUST00000153330ENSMUSG00000100846ENSMUST00000144760
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045J_0001ENSG00000138413ENST00000345146ENST00000415913ENST00000446179ENST00000451391ENST00000462386ENST00000481557ENSG00000188674ENST00000341287ENST00000423952ENST00000428015ENST00000449053ENST00000451342ENST00000453017ENSG00000228111ENST00000413105CIL_00045J_0002ENSMUSG00000025950ENSMUST00000097709ENSMUST00000169032ENSMUSG00000044816ENSMUST00000050047ENSMUST00000148020ENSMUST00000153330ENSMUSG00000100846ENSMUST00000144760
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138413 ENST00000345146 36.593±0.00 13.359±0.00 7.408±0.00 4.474±0.03 42.338±35.47 14.784±2.58 4.435±0.63 40.200±17.71 34.310±24.45 7.867±0.14 0.939±0.28 35.880±14.01 39.693±3.76 23.489±2.30
ENST00000415282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415913 N/A N/A N/A N/A N/A N/A 0.522±0.00 N/A N/A N/A 0.315±0.00 N/A N/A N/A
ENST00000417583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446179 N/A N/A 4.981±0.00 0.900±0.06 N/A 2.148±0.00 3.705±0.00 N/A 22.872±0.00 N/A 1.993±0.00 9.547±0.00 N/A 7.140±0.00
ENST00000451391 N/A N/A N/A N/A N/A 25.912±0.00 N/A 62.142±0.00 27.890±0.00 N/A 4.683±0.00 39.929±0.86 73.231±0.00 N/A
ENST00000462386 N/A N/A N/A N/A N/A N/A 0.799±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000481557 N/A N/A 12.293±0.00 3.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188674 ENST00000341287 N/A N/A N/A 9.261±2.71 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00
ENST00000423952 N/A N/A N/A 9.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.03
ENST00000428015 N/A N/A N/A N/A N/A N/A N/A N/A 0.500±0.00 N/A N/A N/A N/A 0.141±0.00
ENST00000449053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.05
ENST00000451342 0.061±0.00 0.164±0.00 N/A 7.743±0.00 0.057±0.00 0.040±0.00 0.014±0.00 0.015±0.00 0.013±0.00 0.012±0.00 N/A N/A N/A 0.081±0.01
ENST00000451346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00
ENSG00000228111 ENST00000413105 0.023±0.00 0.025±0.00 N/A N/A 0.049±0.00 0.023±0.00 0.022±0.00 N/A N/A N/A 0.085±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025950 ENSMUST00000097709 16.097±2.56 N/A 65.607±19.64 58.337±37.05 N/A 4.438±1.42 3.669±0.48 37.220±7.58 32.240±12.66 5.093±1.35 5.796±0.75 288.467±74.14 29.175±23.14 3.867±1.02
ENSMUST00000149310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169032 N/A N/A N/A N/A N/A N/A 2.421±0.00 N/A N/A N/A 0.615±0.05 N/A N/A 2.137±0.71
ENSMUST00000186222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000044816 ENSMUST00000050047 N/A 0.052±0.00 0.247±0.02 0.131±0.00 N/A 0.043±0.00 0.062±0.00 10.745±4.45 0.038±0.02 0.043±0.03 N/A 1.737±0.70 0.136±0.11 0.046±0.02
ENSMUST00000148020 N/A N/A 1.067±0.11 0.162±0.12 0.152±0.07 N/A N/A 21.813±6.54 0.066±0.02 0.040±0.00 N/A 4.238±3.60 0.207±0.08 0.034±0.00
ENSMUST00000153330 0.085±0.01 N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000100846 ENSMUST00000144760 N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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