C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: isocitrate dehydrogenase 1 (NADP+), soluble
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169032 Idh1-201 ENSMUSG00000025950 10090 - 1:65158618-65186479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleTestisENSMUST00000169032
Transcript ID Heart Muscle Testis
ENSMUST00000169032 2.421±0.00 0.615±0.05 2.137±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045J CIL_00045J_0002 CGP 1:65105285-65186500
CIL_00014C CIL_00014C_0002 CGP 1:65158616-65278695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0004450 IDA:ISS isocitrate dehydrogenase (NADP+) activity
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006097 IEA glyoxylate cycle
GO:0006099 IEA tricarboxylic acid cycle
GO:0006102 IEA:ISS isocitrate metabolic process
GO:0006103 ISS 2-oxoglutarate metabolic process
GO:0006749 IMP glutathione metabolic process
GO:0006979 IDA response to oxidative stress
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345146 IDH1-001 protein_coding Homo_sapiens 0 1873
ENST00000415282 IDH1-009 protein_coding Homo_sapiens 0 645
ENST00000415913 IDH1-006 protein_coding Homo_sapiens 0 1849
ENST00000417583 IDH1-008 protein_coding Homo_sapiens 0 303
ENST00000440581 RP11-288G3.4-001 processed_pseudogene Homo_sapiens 0 1402
ENST00000446179 IDH1-004 protein_coding Homo_sapiens 0 1873
ENST00000451391 IDH1-007 protein_coding Homo_sapiens 0 276
ENST00000462386 IDH1-003 retained_intron Homo_sapiens 0 538
ENST00000481557 IDH1-010 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000484575 IDH1-012 retained_intron Homo_sapiens 0 695

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