C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00046G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182261-ENSG00000175390 CGP 9606 11:7959424-8001862
GeneTranscriptPositionBiotype
ENSG00000175390 (EIF3F)
eukaryotic translation initiation factor 3, subunit F 		ENST00000309828 (EIF3F-201) 7987320-7996169 protein_coding
ENST00000528653 (EIF3F-006) 7987356-7992993 retained_intron
ENST00000528763 (EIF3F-008) 7994698-7996018 retained_intron
ENST00000530219 (EIF3F-005) 7992127-7996169 retained_intron
ENST00000531329 (EIF3F-004) 7987337-7996075 nonsense_mediated_decay
ENST00000531572 (EIF3F-009) 7995014-7995633 protein_coding
ENST00000532882 (EIF3F-007) 7991822-7992998 retained_intron
ENST00000533626 (EIF3F-001) 7970251-8001862 protein_coding
ENSG00000182261 (NLRP10)
NLR family, pyrin domain containing 10 		ENST00000328600 (NLRP10-001) 7959424-7963657 protein_coding
ENST00000526590 (NLRP10-002) 7963299-7965426 protein_coding
CIL_00046G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049709-ENSMUSG00000031029 CGP 10090 7:108921860-108942951
GeneTranscriptPositionBiotype
ENSMUSG00000031029 (Eif3f)
eukaryotic translation initiation factor 3, subunit F 		ENSMUST00000033342 (Eif3f-001) 108934417-108942951 protein_coding
ENSMUST00000147369 (Eif3f-003) 108940308-108941008 retained_intron
ENSMUST00000153596 (Eif3f-002) 108938395-108940476 retained_intron
ENSMUSG00000049709 (Nlrp10)
NLR family, pyrin domain containing 10 		ENSMUST00000055745 (Nlrp10-201) 108921860-108930158 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046G_0001ENSG00000175390ENST00000309828ENST00000528653ENST00000528763ENST00000530219ENST00000531329ENST00000531572ENST00000532882ENST00000533626ENSG00000182261ENST00000328600ENST00000526590CIL_00046G_0002ENSMUSG00000031029ENSMUST00000033342ENSMUST00000147369ENSMUST00000153596ENSMUSG00000049709ENSMUST00000055745
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046G_0001ENSG00000175390ENST00000309828ENST00000531329ENST00000533626ENSG00000182261ENST00000328600CIL_00046G_0002ENSMUSG00000031029ENSMUST00000033342ENSMUSG00000049709ENSMUST00000055745
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175390 ENST00000309828 76.844±0.00 95.052±0.00 4.830±0.00 20.510±13.39 35.063±26.71 56.378±45.74 18.789±12.32 29.500±18.17 18.771±8.85 40.540±32.78 45.836±31.50 118.289±75.50 157.450±17.14 83.719±1.39
ENST00000528653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.273±0.00 5.523±0.00 N/A N/A
ENST00000531572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533626 1.195±0.00 3.078±0.00 N/A N/A 1.610±0.00 2.744±0.00 N/A 1.884±0.00 1.978±1.56 0.914±0.00 1.334±0.75 2.764±0.00 N/A 2.420±0.45
ENSG00000182261 ENST00000328600 N/A N/A 0.039±0.00 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.05 0.049±0.03
ENST00000526590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031029 ENSMUST00000033342 54.566±13.96 52.646±5.14 19.382±5.76 13.167±1.30 63.907±7.66 72.359±6.07 28.842±10.07 48.358±5.02 17.317±5.87 56.748±7.34 14.437±5.25 85.710±36.10 20.395±9.76 29.960±14.12
ENSMUST00000147369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049709 ENSMUST00000055745 0.258±0.04 0.058±0.03 0.204±0.01 0.018±0.01 0.309±0.12 0.702±0.18 4.994±0.46 0.022±0.01 0.011±0.01 0.959±0.75 0.150±0.05 1.749±0.57 0.015±0.01 0.070±0.03

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