C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00046Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015110-ENSDARG00000088699 CGP 7955 17:23612151-23724853
GeneTranscriptPositionBiotype
ENSDARG00000015110 (slc18a2)
solute carrier family 18 (vesicular monoamine), member 2 		ENSDART00000025466 (slc18a2-001) 23612151-23641159 protein_coding
ENSDARG00000088699 (pdzd8)
PDZ domain containing 8 		ENSDART00000122108 (pdzd8-001) 23650277-23724853 protein_coding
CIL_00046Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165646-ENSG00000165650 CGP 9606 10:117241093-117375467
GeneTranscriptPositionBiotype
ENSG00000165650 (PDZD8)
PDZ domain containing 8 		ENST00000334464 (PDZD8-001) 117277274-117375467 protein_coding
ENST00000482496 (PDZD8-002) 117284307-117314235 processed_transcript
ENST00000489302 (PDZD8-003) 117285108-117318978 processed_transcript
ENST00000489491 (PDZD8-004) 117290186-117374481 processed_transcript
ENSG00000277879 (RP11-129M16.4)
 ENST00000614747 (RP11-129M16.4-001) 117267116-117268668 antisense
CIL_00046Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025094-ENSMUSG00000074746 CGP 10090 19:59260878-59345780
GeneTranscriptPositionBiotype
ENSMUSG00000025094 (Slc18a2)
solute carrier family 18 (vesicular monoamine), member 2 		ENSMUST00000026084 (Slc18a2-201) 59260878-59296012 protein_coding
ENSMUSG00000067038 (Rps12-ps3)
ribosomal protein S12, pseudogene 3 		ENSMUST00000086764 (Rps12-ps3-201) 59322290-59322783 protein_coding
ENSMUSG00000074746 (Pdzd8)
PDZ domain containing 8 		ENSMUST00000099274 (Pdzd8-201) 59296084-59345780 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046Y_0001ENSDARG00000015110ENSDART00000025466ENSDARG00000088699ENSDART00000122108CIL_00046Y_0002ENSG00000165650ENST00000334464ENST00000482496ENST00000489302ENST00000489491ENSG00000277879ENST00000614747CIL_00046Y_0003ENSMUSG00000025094ENSMUST00000026084ENSMUSG00000067038ENSMUST00000086764ENSMUSG00000074746ENSMUST00000099274
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046Y_0001ENSDARG00000015110ENSDART00000025466ENSDARG00000088699ENSDART00000122108CIL_00046Y_0002ENSG00000165650ENST00000334464ENST00000482496ENST00000489302ENSG00000277879ENST00000614747CIL_00046Y_0003ENSMUSG00000025094ENSMUST00000026084ENSMUSG00000067038ENSMUST00000086764ENSMUSG00000074746ENSMUST00000099274
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015110 ENSDART00000025466 N/A N/A N/A N/A N/A N/A 9.658±7.13 N/A 0.059±0.00 N/A 0.082±0.00 N/A N/A N/A
ENSDARG00000088699 ENSDART00000122108 N/A N/A N/A 4.097±2.43 N/A N/A 1.931±0.56 1.901±0.20 0.358±0.00 N/A 1.417±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165650 ENST00000334464 6.517±0.00 2.384±0.00 2.129±0.00 6.354±2.65 2.889±0.25 4.614±0.10 2.208±0.88 5.599±0.75 4.074±0.98 3.640±0.47 1.441±0.71 8.551±4.37 1.958±0.45 9.228±2.76
ENST00000482496 N/A N/A N/A N/A N/A N/A 1.878±0.00 N/A N/A N/A N/A 16.091±0.00 N/A 13.693±0.00
ENST00000489302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.940±0.00
ENST00000489491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277879 ENST00000614747 N/A N/A N/A N/A 4.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025094 ENSMUST00000026084 0.171±0.08 6.646±3.78 0.482±0.00 9.610±6.17 0.628±0.35 1.350±0.85 0.487±0.15 0.833±0.38 0.698±0.63 0.383±0.18 0.414±0.05 42.011±20.23 1.209±0.59 0.234±0.21
ENSMUSG00000067038 ENSMUST00000086764 17.676±2.76 116.816±24.91 37.911±5.98 20.617±6.13 13.290±6.56 44.967±34.57 11.130±6.25 31.308±13.76 72.039±46.91 17.780±1.35 11.229±0.90 135.816±51.67 150.586±233.91 28.481±5.98
ENSMUSG00000074746 ENSMUST00000099274 4.347±1.76 11.922±1.53 4.177±0.56 6.652±1.61 5.223±3.50 8.379±2.65 2.063±0.16 3.404±0.85 3.348±0.51 8.691±1.79 1.602±0.12 11.423±4.09 6.235±1.22 22.074±8.44

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