C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431445 AC087650.1-001 ENSG00000237888 9606 + 17:43476198-43476665 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000431445
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000431445 0.286±0.00 0.492±0.00 0.143±0.00 0.130±0.00 0.121±0.00 0.230±0.00 0.081±0.00 0.365±0.00 0.315±0.00 0.062±0.00 0.160±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0001 VISTA 17:43262867-43863532
CIL_00090X CIL_00090X_0001 VISTA 17:43291368-43892559
CIL_000997 CIL_000997_0001 VISTA 17:43327654-43928719
CIL_00047L CIL_00047L_0001 CGP 17:43398959-43544463

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077493 Gm8412-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000176181 Gm20702-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000121617 Gm12340-001 unprocessed_pseudogene Mus_musculus 0 246
ENSMUST00000118671 Gm3267-001 processed_pseudogene Mus_musculus 3e-35 152
ENSMUST00000120590 Gm13740-001 processed_pseudogene Mus_musculus 4e-24 115

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