C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00047R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153107-ENSG00000153208 CGP 9606 2:111766271-112029561
GeneTranscriptPositionBiotype
ENSG00000153107 (ANAPC1)
anaphase promoting complex subunit 1 		ENST00000341068 (ANAPC1-001) 111767637-111884690 protein_coding
ENST00000427997 (ANAPC1-005) 111766271-111856847 protein_coding
ENST00000451367 (ANAPC1-003) 111867998-111880878 nonsense_mediated_decay
ENST00000462785 (ANAPC1-007) 111769065-111780753 retained_intron
ENST00000464695 (ANAPC1-011) 111792371-111795040 retained_intron
ENST00000467878 (ANAPC1-008) 111880510-111884181 retained_intron
ENST00000482177 (ANAPC1-009) 111856378-111857065 retained_intron
ENST00000485325 (ANAPC1-006) 111802533-111821756 retained_intron
ENST00000489177 (ANAPC1-002) 111872800-111884690 processed_transcript
ENSG00000153208 (MERTK)
MER proto-oncogene, tyrosine kinase 		ENST00000295408 (MERTK-001) 111898479-112029561 protein_coding
ENST00000409780 (MERTK-002) 111898629-112029367 protein_coding
ENST00000421804 (MERTK-201) 111898608-112029366 protein_coding
ENST00000439966 (MERTK-003) 111898664-112029000 nonsense_mediated_decay
ENST00000449344 (MERTK-005) 112019413-112028663 protein_coding
ENST00000473065 (MERTK-004) 111997370-112003443 retained_intron
ENST00000616902 (MERTK-202) 111982913-112028563 protein_coding
ENSG00000225496 (AC104651.2)
 ENST00000427559 (AC104651.2-001) 111940302-111941036 processed_pseudogene
ENSG00000230958 (AC093166.4)
 ENST00000448785 (AC093166.4-001) 111865798-111866405 processed_pseudogene
ENSG00000232277 (AC104651.3)
 ENST00000447549 (AC104651.3-001) 111952144-111952671 processed_pseudogene
ENSG00000236307 (AC104651.1)
 ENST00000446998 (AC104651.1-001) 111887914-111888741 processed_pseudogene
ENSG00000240183 (RN7SL297P)
RNA, 7SL, cytoplasmic 297, pseudogene 		ENST00000483161 (RN7SL297P-201) 111930175-111930467 misc_RNA
CIL_00047R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014355-ENSMUSG00000014361 CGP 10090 2:128610104-128802894
GeneTranscriptPositionBiotype
ENSMUSG00000014355 (Anapc1)
anaphase promoting complex subunit 1 		ENSMUST00000014499 (Anapc1-001) 128610104-128687391 protein_coding
ENSMUST00000110332 (Anapc1-003) 128685049-128687354 protein_coding
ENSMUST00000110333 (Anapc1-005) 128642077-128687376 protein_coding
ENSMUST00000123503 (Anapc1-004) 128657721-128663177 processed_transcript
ENSMUST00000124418 (Anapc1-011) 128615403-128618142 processed_transcript
ENSMUST00000134485 (Anapc1-002) 128677127-128687375 processed_transcript
ENSMUST00000143007 (Anapc1-006) 128659600-128664020 processed_transcript
ENSMUST00000145906 (Anapc1-008) 128622375-128627461 processed_transcript
ENSMUST00000151171 (Anapc1-010) 128617573-128622845 processed_transcript
ENSMUST00000154320 (Anapc1-007) 128628543-128630035 processed_transcript
ENSMUST00000154995 (Anapc1-009) 128623740-128628639 processed_transcript
ENSMUSG00000014361 (Mertk)
c-mer proto-oncogene tyrosine kinase 		ENSMUST00000014505 (Mertk-001) 128698956-128802894 protein_coding
ENSMUST00000140221 (Mertk-002) 128771313-128802678 processed_transcript
ENSMUSG00000085036 (Gm14011)
predicted gene 14011 		ENSMUST00000145178 (Gm14011-001) 128751271-128753705 antisense
ENSMUSG00000087785 (Gm23172)
predicted gene, 23172 		ENSMUST00000157160 (Gm23172-201) 128780376-128780499 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047R_0001ENSG00000153107ENST00000341068ENST00000427997ENST00000451367ENST00000462785ENST00000464695ENST00000467878ENST00000482177ENST00000485325ENST00000489177ENSG00000153208ENST00000295408ENST00000409780ENST00000421804ENST00000439966ENST00000449344ENST00000473065ENST00000616902ENSG00000225496ENST00000427559ENSG00000230958ENST00000448785ENSG00000232277ENST00000447549ENSG00000236307ENST00000446998ENSG00000240183ENST00000483161CIL_00047R_0002ENSMUSG00000014355ENSMUST00000014499ENSMUST00000110332ENSMUST00000110333ENSMUST00000123503ENSMUST00000124418ENSMUST00000134485ENSMUST00000143007ENSMUST00000145906ENSMUST00000151171ENSMUST00000154320ENSMUST00000154995ENSMUSG00000014361ENSMUST00000014505ENSMUST00000140221ENSMUSG00000085036ENSMUST00000145178ENSMUSG00000087785ENSMUST00000157160
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047R_0001ENSG00000153107ENST00000341068ENST00000427997ENST00000467878ENST00000485325ENSG00000153208ENST00000295408ENST00000409780ENST00000421804ENST00000439966ENST00000449344ENSG00000225496ENST00000427559ENSG00000230958ENST00000448785ENSG00000232277ENST00000447549ENSG00000236307ENST00000446998ENSG00000240183ENST00000483161CIL_00047R_0002ENSMUSG00000014355ENSMUST00000014499ENSMUST00000110333ENSMUST00000154995ENSMUSG00000014361ENSMUST00000014505ENSMUST00000140221ENSMUSG00000085036ENSMUST00000145178ENSMUSG00000087785ENSMUST00000157160
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153107 ENST00000341068 0.795±0.00 1.431±0.00 0.355±0.00 1.599±0.30 0.842±0.08 0.886±0.18 0.604±0.16 0.942±0.22 0.449±0.00 0.672±0.17 0.772±0.00 2.643±1.47 1.271±0.09 1.710±0.02
ENST00000427997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.768±0.00
ENST00000451367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467878 N/A N/A N/A N/A N/A N/A N/A N/A 1.809±0.00 N/A 3.642±0.00 N/A 4.849±0.00 7.793±0.00
ENST00000482177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485325 0.542±0.00 1.420±0.00 N/A N/A 1.137±0.46 N/A N/A 0.670±0.00 N/A 0.460±0.00 N/A N/A N/A N/A
ENST00000489177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153208 ENST00000295408 0.560±0.00 0.735±0.00 N/A 0.850±0.20 N/A 0.372±0.00 0.737±0.00 1.365±0.00 0.786±0.00 0.283±0.00 N/A N/A N/A 2.197±0.55
ENST00000409780 1.369±0.00 N/A N/A 0.684±0.00 1.347±0.00 N/A N/A N/A 0.634±0.00 N/A 0.555±0.00 0.809±0.00 N/A 1.149±0.00
ENST00000421804 1.049±0.00 N/A 2.960±0.00 1.422±0.00 2.705±0.00 0.872±0.36 0.574±0.00 2.369±0.02 2.709±0.00 1.277±0.22 N/A 2.003±0.51 3.705±1.28 N/A
ENST00000439966 3.236±0.00 3.743±0.00 N/A 3.637±0.00 2.362±1.30 1.629±0.34 1.418±0.00 8.458±0.00 2.820±2.04 1.604±0.09 0.320±0.06 3.675±1.82 5.008±2.13 5.910±2.36
ENST00000449344 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.650±0.00 0.646±0.00 N/A N/A N/A
ENST00000473065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225496 ENST00000427559 N/A 0.119±0.00 N/A 0.058±0.00 0.349±0.00 0.027±0.00 N/A N/A 0.039±0.00 N/A N/A N/A N/A 0.026±0.00
ENSG00000230958 ENST00000448785 N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 0.674±0.62 N/A N/A N/A N/A N/A
ENSG00000232277 ENST00000447549 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A 0.331±0.25 N/A N/A N/A N/A N/A
ENSG00000236307 ENST00000446998 N/A 0.082±0.00 N/A N/A 0.105±0.00 N/A N/A 0.107±0.00 N/A N/A N/A 0.289±0.16 0.132±0.00 0.197±0.07
ENSG00000240183 ENST00000483161 N/A 0.120±0.00 N/A N/A 0.310±0.25 N/A 0.139±0.08 N/A 0.405±0.00 N/A N/A 0.189±0.00 N/A 0.183±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014355 ENSMUST00000014499 16.171±3.34 10.283±1.49 8.140±2.65 9.159±3.96 13.755±0.99 10.147±2.56 1.954±1.22 8.767±1.31 5.112±2.64 16.290±0.53 3.781±1.48 19.066±4.07 8.317±2.74 4.835±2.42
ENSMUST00000110332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.651±1.13 6.405±0.90 1.363±0.00
ENSMUST00000123503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154995 N/A N/A N/A N/A N/A N/A N/A N/A 9.551±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000014361 ENSMUST00000014505 2.843±0.84 2.831±0.34 1.441±0.16 1.049±1.00 1.721±0.46 1.061±0.00 0.725±0.40 5.064±1.86 1.658±0.65 5.457±2.31 0.215±0.05 4.443±1.65 5.476±3.24 0.236±0.03
ENSMUST00000140221 1.095±0.17 N/A 2.049±0.26 4.874±0.00 N/A 3.321±0.75 0.312±0.00 1.844±0.00 1.651±0.26 N/A 0.293±0.03 4.815±2.21 3.536±1.97 0.606±0.27
ENSMUSG00000085036 ENSMUST00000145178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 0.519±0.40 N/A
ENSMUSG00000087785 ENSMUST00000157160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.878±3.58 N/A N/A

Loading