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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00048Y_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000125124-ENSG00000102891 | CGP | 9606 | 16:56466836-56568957  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000087263  (OGFOD1)2-oxoglutarate and iron-dependent oxygenase domain containing 1 |
ENST00000336111 (OGFOD1-002)
|
56451524-56477129 | nonsense_mediated_decay | |
|
ENST00000561646 (OGFOD1-009)
|
56451521-56467198 | protein_coding | ||
|
ENST00000562150 (OGFOD1-011)
|
56451521-56466203 | protein_coding | ||
|
ENST00000563733 (OGFOD1-005)
|
56451533-56458901 | retained_intron | ||
|
ENST00000565209 (OGFOD1-006)
|
56458129-56466179 | processed_transcript | ||
|
ENST00000565682 (OGFOD1-010)
|
56451523-56462628 | nonsense_mediated_decay | ||
|
ENST00000566157 (OGFOD1-001)
|
56451490-56479100 | protein_coding | ||
|
ENST00000568172 (OGFOD1-008)
|
56451540-56466268 | processed_transcript | ||
|
ENST00000568397 (OGFOD1-003)
|
56451562-56476335 | protein_coding | ||
|
ENST00000569645 (OGFOD1-004)
|
56451556-56453693 | retained_intron | ||
|
ENST00000569802 (OGFOD1-007)
|
56451521-56466183 | nonsense_mediated_decay | ||
|
ENSG00000102891 (MT4) metallothionein 4 |
ENST00000219162 (MT4-001)
|
56565049-56568957 | protein_coding | |
|
ENSG00000125124 (BBS2) Bardet-Biedl syndrome 2 |
ENST00000245157 (BBS2-001)
|
56484385-56520283 | protein_coding | |
|
ENST00000561853 (BBS2-018)
|
56502222-56506163 | retained_intron | ||
|
ENST00000561877 (BBS2-010)
|
56497776-56500946 | nonsense_mediated_decay | ||
|
ENST00000561951 (BBS2-019)
|
56501647-56511278 | processed_transcript | ||
|
ENST00000562012 (BBS2-017)
|
56499832-56509989 | nonsense_mediated_decay | ||
|
ENST00000562059 (BBS2-012)
|
56500882-56501806 | retained_intron | ||
|
ENST00000562813 (BBS2-003)
|
56484388-56500919 | retained_intron | ||
|
ENST00000564123 (BBS2-021)
|
56466836-56485738 | protein_coding | ||
|
ENST00000564459 (BBS2-020)
|
56470403-56497802 | protein_coding | ||
|
ENST00000565378 (BBS2-008)
|
56510004-56520056 | processed_transcript | ||
|
ENST00000565781 (BBS2-002)
|
56484385-56520087 | retained_intron | ||
|
ENST00000565859 (BBS2-009)
|
56505978-56509967 | retained_intron | ||
|
ENST00000566210 (BBS2-014)
|
56499786-56501176 | retained_intron | ||
|
ENST00000566410 (BBS2-011)
|
56498490-56499923 | processed_transcript | ||
|
ENST00000566452 (BBS2-016)
|
56499701-56500945 | retained_intron | ||
|
ENST00000566495 (BBS2-013)
|
56497743-56501594 | retained_intron | ||
|
ENST00000566689 (BBS2-007)
|
56509982-56519621 | processed_transcript | ||
|
ENST00000568104 (BBS2-005)
|
56484345-56520041 | protein_coding | ||
|
ENST00000569192 (BBS2-015)
|
56485607-56499978 | retained_intron | ||
|
ENST00000569342 (BBS2-004)
|
56501403-56519996 | retained_intron | ||
|
ENST00000569941 (BBS2-006)
|
56509957-56516131 | protein_coding | ||
|
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| CIL_00048Y_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000031755-ENSMUSG00000031757 | CGP | 10090 | 8:94067954-94139031 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000031755 (Bbs2) Bardet-Biedl syndrome 2 (human) |
ENSMUST00000034206 (Bbs2-001)
|
94067954-94098811 | protein_coding | |
|
ENSMUST00000170208 (Bbs2-003)
|
94068144-94070213 | processed_transcript | ||
|
ENSMUST00000172347 (Bbs2-002)
|
94075140-94079756 | processed_transcript | ||
|
ENSMUSG00000031757 (Mt4) metallothionein 4 |
ENSMUST00000034207 (Mt4-201)
|
94137204-94139031 | protein_coding | |
|
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Expression Patterns
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