C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004A6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000078304-ENSG00000197102 CGP 9606 14:101761798-102050792
GeneTranscriptPositionBiotype
ENSG00000078304 (PPP2R5C)
protein phosphatase 2, regulatory subunit B', gamma 		ENST00000328724 (PPP2R5C-002) 101761885-101927685 protein_coding
ENST00000334743 (PPP2R5C-001) 101809895-101927977 protein_coding
ENST00000350249 (PPP2R5C-005) 101809803-101927519 protein_coding
ENST00000422945 (PPP2R5C-201) 101761798-101927989 protein_coding
ENST00000445439 (PPP2R5C-006) 101809895-101912625 protein_coding
ENST00000553554 (PPP2R5C-016) 101786111-101797701 protein_coding
ENST00000553730 (PPP2R5C-008) 101809866-101883016 retained_intron
ENST00000553842 (PPP2R5C-021) 101823878-101836525 processed_transcript
ENST00000553890 (PPP2R5C-028) 101762928-101836451 protein_coding
ENST00000554137 (PPP2R5C-027) 101882161-101894517 nonsense_mediated_decay
ENST00000554147 (PPP2R5C-025) 101917769-101925449 retained_intron
ENST00000554442 (PPP2R5C-007) 101761862-101836573 protein_coding
ENST00000554504 (PPP2R5C-018) 101762905-101824229 processed_transcript
ENST00000555237 (PPP2R5C-024) 101906505-101921382 protein_coding
ENST00000556068 (PPP2R5C-004) 101761862-101821098 processed_transcript
ENST00000556086 (PPP2R5C-015) 101786121-101789896 processed_transcript
ENST00000556218 (PPP2R5C-012) 101882205-101912600 processed_transcript
ENST00000556260 (PPP2R5C-014) 101761870-101767049 protein_coding
ENST00000556307 (PPP2R5C-019) 101809837-101882205 nonsense_mediated_decay
ENST00000556373 (PPP2R5C-022) 101824838-101856885 processed_transcript
ENST00000556493 (PPP2R5C-020) 101823653-101856757 processed_transcript
ENST00000556570 (PPP2R5C-029) 101879222-101883562 processed_transcript
ENST00000556805 (PPP2R5C-011) 101889793-101893053 retained_intron
ENST00000556946 (PPP2R5C-017) 101809835-101836701 protein_coding
ENST00000557071 (PPP2R5C-023) 101909648-101925307 nonsense_mediated_decay
ENST00000557095 (PPP2R5C-009) 101809905-101906647 protein_coding
ENST00000557268 (PPP2R5C-003) 101761900-101925623 protein_coding
ENST00000557534 (PPP2R5C-010) 101883302-101901744 nonsense_mediated_decay
ENST00000557621 (PPP2R5C-026) 101809834-101893053 protein_coding
ENST00000557714 (PPP2R5C-030) 101809869-101836432 protein_coding
ENST00000557716 (PPP2R5C-013) 101883537-101912625 protein_coding
ENST00000561006 (PPP2R5C-031) 101901857-101912624 protein_coding
ENST00000607042 (PPP2R5C-032) 101824162-101824478 processed_transcript
ENSG00000197102 (DYNC1H1)
dynein, cytoplasmic 1, heavy chain 1 		ENST00000360184 (DYNC1H1-001) 101964528-102050791 protein_coding
ENST00000553423 (DYNC1H1-008) 102034137-102039054 protein_coding
ENST00000554854 (DYNC1H1-011) 102027507-102029833 retained_intron
ENST00000555062 (DYNC1H1-003) 102047761-102050792 retained_intron
ENST00000555102 (DYNC1H1-005) 102042397-102043697 processed_transcript
ENST00000555204 (DYNC1H1-012) 102020034-102027448 processed_transcript
ENST00000555800 (DYNC1H1-009) 102038380-102039096 retained_intron
ENST00000556139 (DYNC1H1-007) 102039491-102042121 retained_intron
ENST00000556229 (DYNC1H1-004) 102047661-102048729 retained_intron
ENST00000556499 (DYNC1H1-006) 102040388-102041128 retained_intron
ENST00000556791 (DYNC1H1-010) 102033062-102037598 processed_transcript
ENSG00000207208 (RNU6-790P)
RNA, U6 small nuclear 790, pseudogene 		ENST00000384479 (RNU6-790P-201) 101803227-101803331 snRNA
ENSG00000256705 (CTD-2017C7.1)
 ENST00000556205 (CTD-2017C7.1-001) 101833435-101839531 antisense
ENSG00000259013 (RP11-1017G21.3)
 ENST00000556294 (RP11-1017G21.3-001) 101969364-101969601 processed_pseudogene
ENSG00000259088 (CTD-2017C7.2)
 ENST00000554859 (CTD-2017C7.2-001) 101796555-101810321 antisense
ENSG00000259161 (CTD-2017C7.3)
 ENST00000553295 (CTD-2017C7.3-001) 101843394-101844122 processed_pseudogene
ENSG00000271780 (RP11-1017G21.5)
 ENST00000607414 (RP11-1017G21.5-001) 101948347-101949425 lincRNA
ENSG00000272444 (RP11-1017G21.6)
 ENST00000607122 (RP11-1017G21.6-001) 101952416-101953063 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0004A6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017843-ENSMUSG00000018707 CGP 10090 12:110485739-110666945
GeneTranscriptPositionBiotype
ENSMUSG00000017843 (Ppp2r5c)
protein phosphatase 2, regulatory subunit B', gamma 		ENSMUST00000084985 (Ppp2r5c-201) 110485739-110583061 protein_coding
ENSMUST00000109832 (Ppp2r5c-202) 110485739-110583061 protein_coding
ENSMUSG00000018707 (Dync1h1)
dynein cytoplasmic 1 heavy chain 1 		ENSMUST00000018851 (Dync1h1-001) 110601452-110666945 protein_coding
ENSMUST00000107660 (Dync1h1-004) 110659092-110659844 retained_intron
ENSMUST00000166185 (Dync1h1-003) 110656405-110657343 retained_intron
ENSMUST00000166323 (Dync1h1-006) 110663189-110664874 retained_intron
ENSMUST00000167395 (Dync1h1-005) 110654162-110658167 protein_coding
ENSMUST00000170024 (Dync1h1-008) 110660934-110661501 retained_intron
ENSMUST00000171535 (Dync1h1-007) 110660592-110661470 retained_intron
ENSMUST00000172218 (Dync1h1-002) 110640524-110641536 retained_intron

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A6_0001ENSG00000078304ENST00000328724ENST00000334743ENST00000350249ENST00000422945ENST00000445439ENST00000553554ENST00000553730ENST00000553842ENST00000553890ENST00000554137ENST00000554147ENST00000554442ENST00000554504ENST00000555237ENST00000556068ENST00000556086ENST00000556218ENST00000556260ENST00000556307ENST00000556373ENST00000556493ENST00000556570ENST00000556805ENST00000556946ENST00000557071ENST00000557095ENST00000557268ENST00000557534ENST00000557621ENST00000557714ENST00000557716ENST00000561006ENST00000607042ENSG00000197102ENST00000360184ENST00000553423ENST00000554854ENST00000555062ENST00000555102ENST00000555204ENST00000555800ENST00000556139ENST00000556229ENST00000556499ENST00000556791ENSG00000207208ENST00000384479ENSG00000256705ENST00000556205ENSG00000259013ENST00000556294ENSG00000259088ENST00000554859ENSG00000259161ENST00000553295ENSG00000271780ENST00000607414ENSG00000272444ENST00000607122CIL_0004A6_0002ENSMUSG00000017843ENSMUST00000084985ENSMUST00000109832ENSMUSG00000018707ENSMUST00000018851ENSMUST00000107660ENSMUST00000166185ENSMUST00000166323ENSMUST00000167395ENSMUST00000170024ENSMUST00000171535ENSMUST00000172218
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A6_0001ENSG00000078304ENST00000328724ENST00000334743ENST00000350249ENST00000422945ENST00000445439ENST00000556068ENST00000556260ENST00000557095ENST00000557268ENSG00000197102ENST00000360184ENST00000555062ENSG00000207208ENST00000384479ENSG00000256705ENST00000556205ENSG00000259013ENST00000556294ENSG00000259088ENST00000554859ENSG00000259161ENST00000553295ENSG00000271780ENST00000607414ENSG00000272444ENST00000607122CIL_0004A6_0002ENSMUSG00000017843ENSMUST00000084985ENSMUST00000109832ENSMUSG00000018707ENSMUST00000018851
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078304 ENST00000328724 7.081±0.00 8.467±0.00 3.419±0.00 8.038±2.68 6.772±0.11 8.041±3.24 7.513±4.58 4.698±1.54 4.018±0.59 7.793±2.30 5.365±1.88 6.762±1.97 4.598±0.45 13.976±1.38
ENST00000334743 4.066±0.00 5.825±0.00 N/A 7.356±0.00 4.993±0.00 8.763±0.00 4.236±2.26 3.769±0.00 2.157±0.00 3.571±0.26 2.057±0.00 6.742±1.02 2.927±0.02 9.354±0.00
ENST00000350249 4.183±0.00 4.667±0.00 N/A N/A N/A N/A 5.251±0.00 2.618±0.00 N/A N/A N/A N/A 1.440±0.00 N/A
ENST00000422945 N/A N/A N/A N/A N/A 2.711±0.00 N/A N/A 1.972±0.00 N/A N/A N/A N/A N/A
ENST00000445439 N/A N/A N/A N/A 10.681±0.00 N/A 4.787±0.00 2.785±0.00 4.369±0.00 8.493±0.23 N/A 4.065±0.00 5.062±1.70 N/A
ENST00000553554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556068 N/A N/A N/A N/A N/A 3.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556260 15.265±0.00 11.576±0.00 N/A 9.496±1.39 10.452±2.40 6.381±0.00 8.793±0.00 4.592±0.85 5.087±0.73 7.045±0.00 3.055±0.00 4.961±0.78 3.732±0.00 9.471±0.40
ENST00000556307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.809±0.00 N/A N/A N/A
ENST00000557268 N/A N/A 3.466±0.00 N/A N/A N/A 3.326±0.00 2.364±0.00 4.193±0.00 N/A N/A 7.243±0.00 N/A N/A
ENST00000557534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197102 ENST00000360184 18.763±0.00 6.870±0.00 1.831±0.00 33.441±4.54 16.654±5.33 15.694±2.31 19.574±8.57 6.702±0.68 10.559±8.44 13.227±2.02 34.154±21.15 9.496±4.07 7.773±1.31 17.504±1.88
ENST00000553423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555062 N/A 36.737±0.00 N/A 99.517±0.00 N/A N/A N/A N/A N/A 64.748±0.00 N/A N/A N/A N/A
ENST00000555102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207208 ENST00000384479 N/A 0.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.025±0.00 N/A 1.436±0.00
ENSG00000256705 ENST00000556205 0.270±0.00 1.771±0.00 N/A 0.280±0.00 0.911±0.25 0.449±0.00 0.200±0.00 0.635±0.05 0.284±0.20 0.337±0.00 0.347±0.00 0.314±0.12 N/A 0.492±0.00
ENSG00000259013 ENST00000556294 N/A N/A N/A 0.072±0.00 N/A N/A 0.292±0.00 N/A 0.589±0.00 0.611±0.00 N/A 0.491±0.00 N/A N/A
ENSG00000259088 ENST00000554859 0.046±0.00 0.297±0.00 0.134±0.00 0.448±0.36 0.971±0.00 N/A 0.353±0.14 0.323±0.00 N/A 0.053±0.00 N/A 0.594±0.03 0.801±0.18 0.907±0.00
ENSG00000259161 ENST00000553295 0.097±0.00 0.017±0.00 0.104±0.00 0.034±0.00 0.652±0.00 0.245±0.20 0.371±0.00 0.210±0.14 0.200±0.18 0.184±0.00 0.803±0.00 0.566±0.00 0.023±0.00 0.045±0.00
ENSG00000271780 ENST00000607414 1.754±0.00 2.023±0.00 0.713±0.00 1.898±0.64 1.181±0.88 0.779±0.69 0.533±0.19 0.978±0.32 0.303±0.07 0.257±0.10 0.319±0.00 1.456±1.20 0.931±0.23 0.992±0.15
ENSG00000272444 ENST00000607122 0.812±0.00 1.402±0.00 N/A 1.251±0.07 0.965±0.00 0.510±0.12 0.512±0.11 0.977±0.00 0.276±0.13 0.083±0.04 0.105±0.00 0.437±0.21 0.231±0.18 0.665±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017843 ENSMUST00000084985 6.348±0.21 3.281±0.83 8.195±1.42 N/A 4.675±1.09 2.767±1.12 6.404±0.40 3.490±0.92 1.631±0.69 7.742±1.46 5.391±1.45 4.986±2.05 2.586±0.75 22.522±0.65
ENSMUST00000109832 9.702±3.02 5.355±1.90 12.249±1.78 12.737±1.23 5.832±2.68 6.066±1.04 11.391±2.12 4.745±1.59 5.002±2.43 7.232±2.67 6.235±0.54 5.339±2.74 5.387±2.30 55.267±10.98
ENSMUSG00000018707 ENSMUST00000018851 22.103±5.77 20.155±2.38 11.220±3.30 49.289±40.31 19.297±7.51 18.454±5.08 12.835±1.73 14.723±2.27 4.122±1.03 25.226±3.01 12.237±0.85 27.463±12.37 28.888±14.02 25.684±6.74
ENSMUST00000107660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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