C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B', gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328724 PPP2R5C-002 ENSG00000078304 9606 + 14:101761885-101927685 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328724
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328724 7.081±0.00 8.467±0.00 3.419±0.00 8.038±2.68 6.772±0.11 8.041±3.24 7.513±4.58 4.698±1.54 4.018±0.59 7.793±2.30 5.365±1.88 6.762±1.97 4.598±0.45 13.976±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A7 CIL_0004A7_0001 CGP 14:101561351-101927989
CIL_0004A6 CIL_0004A6_0001 CGP 14:101761798-102050792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IDA:IEA protein phosphatase type 2A complex
GO:0000775 IDA chromosome, centromeric region
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006977 IDA DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007165 NAS:IEA signal transduction
GO:0008285 IDA negative regulation of cell proliferation
GO:0008601 IDA:IEA protein phosphatase type 2A regulator activity
GO:0042771 IMP intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043161 IMP proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109832 Ppp2r5c-202 protein_coding Mus_musculus 0 1980
ENSMUST00000084985 Ppp2r5c-201 protein_coding Mus_musculus 0 1681
ENSMUST00000002839 Ppp2r5d-201 protein_coding Mus_musculus 0 614
ENSDART00000025644 ppp2r5a-001 protein_coding Danio_rerio 8.96831e-44 183
ENSDART00000157067 ppp2r5a-201 protein_coding Danio_rerio 3.99931e-42 178

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