C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B', gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445439 PPP2R5C-006 ENSG00000078304 9606 + 14:101809895-101912625 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungOvaryPlacentaENST00000445439
Transcript ID Breast Heart Kidney Liver Lung Ovary Placenta
ENST00000445439 10.681±0.00 4.787±0.00 2.785±0.00 4.369±0.00 8.493±0.23 4.065±0.00 5.062±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A7 CIL_0004A7_0001 CGP 14:101561351-101927989
CIL_0004A6 CIL_0004A6_0001 CGP 14:101761798-102050792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IEA:IDA protein phosphatase type 2A complex
GO:0000775 IDA chromosome, centromeric region
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006508 IDA proteolysis
GO:0006977 IDA DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007165 IEA:NAS signal transduction
GO:0008233 IDA peptidase activity
GO:0008285 IDA negative regulation of cell proliferation
GO:0008601 IEA:IDA protein phosphatase type 2A regulator activity
GO:0016021 IDA integral component of membrane
GO:0016485 IDA protein processing
GO:0042771 IMP intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043161 IMP proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109832 Ppp2r5c-202 protein_coding Mus_musculus 0 1875
ENSMUST00000084985 Ppp2r5c-201 protein_coding Mus_musculus 0 1873
ENSMUST00000002839 Ppp2r5d-201 protein_coding Mus_musculus 0 614
ENSDART00000025644 ppp2r5a-001 protein_coding Danio_rerio 2.94273e-44 183
ENSDART00000157067 ppp2r5a-201 protein_coding Danio_rerio 1.99965e-42 178

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