C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013057-ENSDARG00000013533 CGP 7955 3:23998932-24015223
GeneTranscriptPositionBiotype
ENSDARG00000013057 (hoxb5a)
homeo box B5a 		ENSDART00000025449 (hoxb5a-001) 23998932-24001336 protein_coding
ENSDARG00000013533 (hoxb4a)
homeo box B4a 		ENSDART00000012470 (hoxb4a-001) 24013049-24015223 protein_coding
ENSDART00000151584 (hoxb4a-002) 24002080-24014840 protein_coding
CIL_0004DH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038700-ENSMUSG00000038692 CGP 10090 11:96303336-96321638
GeneTranscriptPositionBiotype
ENSMUSG00000038692 (Hoxb4)
homeobox B4 		ENSMUST00000049241 (Hoxb4-001) 96318267-96321638 protein_coding
ENSMUSG00000038700 (Hoxb5)
homeobox B5 		ENSMUST00000049272 (Hoxb5-001) 96303512-96306120 protein_coding
ENSMUST00000190470 (Hoxb5-002) 96303336-96306121 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DH_0001ENSDARG00000013057ENSDART00000025449ENSDARG00000013533ENSDART00000012470ENSDART00000151584CIL_0004DH_0002ENSMUSG00000038692ENSMUST00000049241ENSMUSG00000038700ENSMUST00000049272ENSMUST00000190470
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DH_0001ENSDARG00000013057ENSDART00000025449ENSDARG00000013533ENSDART00000012470CIL_0004DH_0002ENSMUSG00000038692ENSMUST00000049241ENSMUSG00000038700ENSMUST00000049272ENSMUST00000190470
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013057 ENSDART00000025449 N/A N/A N/A 0.842±0.18 N/A N/A 0.262±0.16 1.792±0.73 0.152±0.00 N/A 0.833±0.00 N/A N/A N/A
ENSDARG00000013533 ENSDART00000012470 N/A N/A N/A 0.388±0.00 N/A N/A 0.370±0.27 0.555±0.00 0.033±0.00 N/A 0.151±0.00 N/A N/A N/A
ENSDART00000151584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038692 ENSMUST00000049241 1.988±1.01 9.444±0.92 4.449±1.16 1.563±1.97 3.459±1.50 1.515±0.94 0.318±0.10 4.249±2.17 0.446±0.16 5.774±0.75 0.234±0.06 2.212±0.82 0.460±0.17 0.250±0.31
ENSMUSG00000038700 ENSMUST00000049272 3.088±0.05 18.432±2.30 N/A 8.017±6.70 2.140±0.99 4.423±0.51 0.082±0.02 2.897±0.28 0.228±0.06 6.557±1.16 0.206±0.11 3.082±1.04 0.189±0.07 0.199±0.13
ENSMUST00000190470 0.412±0.01 2.726±0.22 N/A N/A 0.284±0.14 0.745±0.15 N/A 0.545±0.01 0.026±0.00 N/A 0.067±0.03 0.608±0.23 0.105±0.05 0.019±0.00

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