C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S12, pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117447 Rps12-ps10-001 ENSMUSG00000070692 10090 + 2:122219993-122220391 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117447 0.758±0.24 0.223±0.01 0.464±0.16 0.210±0.13 0.927±0.77 0.429±0.02 0.252±0.12 0.169±0.07 0.901±0.73 0.686±0.00 0.204±0.00 0.746±0.37 0.361±0.31 0.310±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DN CIL_0004DN_0002 CGP 2:122186272-122265340

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230050 RPS12-001 protein_coding Homo_sapiens 0 540
ENST00000407698 RP11-812I20.2-001 processed_pseudogene Homo_sapiens 0 307
ENST00000414823 AC009413.2-001 processed_pseudogene Homo_sapiens 0 507
ENST00000415024 RP11-313E4.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000440335 RP11-613F7.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000442381 RPS12P18-001 processed_pseudogene Homo_sapiens 0 318
ENST00000461060 RP11-621K7.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000463278 CTC-398G3.2-001 processed_pseudogene Homo_sapiens 0 508
ENST00000464109 RPS12P20-001 processed_pseudogene Homo_sapiens 1.00053e-42 176
ENST00000484182 RP11-538P18.1-001 processed_pseudogene Homo_sapiens 0 224
ENST00000492017 RPS12P26-001 transcribed_processed_pseudogene Homo_sapiens 0 462
ENST00000616756 RP11-174N3.4-001 processed_pseudogene Homo_sapiens 0 231

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