C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S7 pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464254 RPS7P10-001 ENSG00000226525 9606 - 13:21628413-21629015 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000464254
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000464254 0.080±0.00 0.284±0.00 0.150±0.09 0.172±0.00 0.133±0.00 0.026±0.00 0.029±0.00 0.106±0.00 0.165±0.00 0.025±0.00 0.255±0.13 0.047±0.00 0.111±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MD CIL_0004MD_0001 CGP 13:21492691-21704498

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074267 Rps7-201 protein_coding Mus_musculus 0 730
ENSMUST00000178147 Gm6472-002 processed_transcript Mus_musculus 0 713
ENSMUST00000187973 Gm6472-001 transcribed_processed_pseudogene Mus_musculus 0 708
ENSMUST00000104916 Gm9493-201 protein_coding Mus_musculus 0 699
ENSMUST00000190473 RP23-300D5.1-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000119317 Gm8019-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000178086 Gm4761-201 processed_pseudogene Mus_musculus 0 558
ENSMUST00000120919 Gm12900-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000163501 Gm17053-001 processed_pseudogene Mus_musculus 0 292

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