C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004NH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000233932-ENSG00000074803 CGP 9606 15:48191539-48304078
GeneTranscriptPositionBiotype
ENSG00000074803 (SLC12A1)
solute carrier family 12 (sodium/potassium/chloride transporter), member 1 		ENST00000330289 (SLC12A1-002) 48207534-48237349 protein_coding
ENST00000380993 (SLC12A1-201) 48206301-48304076 protein_coding
ENST00000396577 (SLC12A1-001) 48206302-48304078 protein_coding
ENST00000558252 (SLC12A1-007) 48222328-48304076 retained_intron
ENST00000558405 (SLC12A1-006) 48207706-48302997 protein_coding
ENST00000558805 (SLC12A1-012) 48232725-48235344 protein_coding
ENST00000559641 (SLC12A1-005) 48191765-48285127 protein_coding
ENST00000559723 (SLC12A1-010) 48225851-48234925 processed_transcript
ENST00000560692 (SLC12A1-008) 48224326-48304078 retained_intron
ENST00000561031 (SLC12A1-011) 48207720-48221445 protein_coding
ENST00000561127 (SLC12A1-009) 48191664-48230430 protein_coding
ENSG00000233932 (CTXN2)
cortexin 2 		ENST00000417307 (CTXN2-001) 48191539-48203756 protein_coding
ENSG00000259385 (RP11-605F22.1)
 ENST00000559875 (RP11-605F22.1-001) 48192191-48201684 antisense
CIL_0004NH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074872-ENSMUSG00000027202 CGP 10090 2:125136692-125230002
GeneTranscriptPositionBiotype
ENSMUSG00000027202 (Slc12a1)
solute carrier family 12, member 1 		ENSMUST00000028630 (Slc12a1-002) 125152600-125230002 protein_coding
ENSMUST00000110494 (Slc12a1-001) 125152505-125230002 protein_coding
ENSMUST00000110495 (Slc12a1-003) 125152600-125229999 protein_coding
ENSMUST00000147095 (Slc12a1-004) 125152580-125167145 retained_intron
ENSMUSG00000074872 (Ctxn2)
cortexin 2 		ENSMUST00000099452 (Ctxn2-201) 125136692-125147839 protein_coding
ENSMUSG00000086416 (Gm14002)
predicted gene 14002 		ENSMUST00000123574 (Gm14002-001) 125207529-125217512 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004NH_0001ENSG00000074803ENST00000330289ENST00000380993ENST00000396577ENST00000558252ENST00000558405ENST00000558805ENST00000559641ENST00000559723ENST00000560692ENST00000561031ENST00000561127ENSG00000233932ENST00000417307ENSG00000259385ENST00000559875CIL_0004NH_0002ENSMUSG00000027202ENSMUST00000028630ENSMUST00000110494ENSMUST00000110495ENSMUST00000147095ENSMUSG00000074872ENSMUST00000099452ENSMUSG00000086416ENSMUST00000123574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004NH_0001ENSG00000074803ENST00000330289ENST00000380993ENST00000396577ENST00000558252ENST00000558405ENST00000558805ENST00000560692ENST00000561031ENST00000561127ENSG00000233932ENST00000417307ENSG00000259385ENST00000559875CIL_0004NH_0002ENSMUSG00000027202ENSMUST00000028630ENSMUST00000110494ENSMUST00000110495ENSMUST00000147095ENSMUSG00000074872ENSMUST00000099452ENSMUSG00000086416ENSMUST00000123574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074803 ENST00000330289 N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A 0.025±0.00 N/A N/A
ENST00000380993 0.002±0.00 N/A N/A 0.110±0.00 N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A 0.198±0.00
ENST00000396577 N/A N/A N/A N/A N/A N/A N/A 109.060±0.00 0.010±0.00 N/A N/A N/A N/A N/A
ENST00000558252 N/A 0.002±0.00 40.152±0.00 N/A N/A 0.018±0.00 0.002±0.00 N/A N/A N/A 0.010±0.00 N/A N/A N/A
ENST00000558405 N/A N/A N/A 0.427±0.00 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A
ENST00000558805 N/A N/A N/A N/A N/A 0.328±0.00 N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A
ENST00000559641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560692 N/A N/A N/A 0.091±0.00 N/A N/A 0.009±0.00 N/A N/A N/A 0.011±0.00 0.015±0.01 0.003±0.00 N/A
ENST00000561031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENST00000561127 N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233932 ENST00000417307 N/A N/A N/A 0.548±0.08 N/A 0.063±0.00 N/A 0.212±0.00 N/A N/A N/A 0.007±0.00 N/A N/A
ENSG00000259385 ENST00000559875 0.021±0.00 N/A N/A 3.516±0.52 0.532±0.00 0.303±0.14 N/A N/A N/A N/A N/A 0.144±0.05 N/A 3.376±1.73
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027202 ENSMUST00000028630 N/A N/A N/A 0.024±0.02 0.003±0.00 N/A 0.001±0.00 18.751±4.41 0.001±0.00 0.017±0.00 N/A 0.023±0.01 0.014±0.01 0.147±0.09
ENSMUST00000110494 N/A N/A N/A N/A 0.039±0.00 N/A N/A 17.393±3.16 N/A N/A N/A N/A N/A N/A
ENSMUST00000110495 N/A N/A N/A 0.010±0.00 0.007±0.00 N/A 0.006±0.00 79.625±11.42 0.001±0.00 0.021±0.01 N/A 0.007±0.00 0.030±0.02 0.086±0.03
ENSMUST00000147095 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 0.020±0.00 N/A 0.020±0.00 N/A
ENSMUSG00000074872 ENSMUST00000099452 N/A N/A 0.008±0.00 1.706±0.76 N/A 0.208±0.00 0.040±0.00 0.159±0.05 0.008±0.00 0.066±0.01 N/A 0.033±0.00 0.022±0.01 0.486±0.12
ENSMUSG00000086416 ENSMUST00000123574 0.040±0.00 N/A 0.003±0.00 0.063±0.02 N/A N/A N/A 0.449±0.05 0.012±0.01 N/A N/A 0.049±0.03 0.030±0.02 0.011±0.00

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