C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004OR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055276-ENSDARG00000012141 CGP 7955 13:26019401-26065964
GeneTranscriptPositionBiotype
ENSDARG00000012141 (papolg)
poly(A) polymerase gamma 		ENSDART00000015154 (papolg-001) 26048235-26065964 protein_coding
ENSDART00000124089 (papolg-201) 26048238-26065858 protein_coding
ENSDART00000142640 (papolg-002) 26049217-26051025 retained_intron
ENSDARG00000055276 (rel)
v-rel reticuloendotheliosis viral oncogene homolog 		ENSDART00000077612 (rel-001) 26019401-26043715 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004OR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020275-ENSMUSG00000020273 CGP 10090 11:23741514-23895253
GeneTranscriptPositionBiotype
ENSMUSG00000020273 (Papolg)
poly(A) polymerase gamma 		ENSMUST00000020513 (Papolg-001) 23862646-23895253 protein_coding
ENSMUST00000102863 (Papolg-002) 23870056-23895236 protein_coding
ENSMUST00000145013 (Papolg-003) 23865244-23868470 protein_coding
ENSMUST00000150711 (Papolg-004) 23866411-23891904 processed_transcript
ENSMUSG00000020275 (Rel)
reticuloendotheliosis oncogene 		ENSMUST00000102864 (Rel-001) 23741514-23770970 protein_coding
ENSMUSG00000087741 (Gm23827)
predicted gene, 23827 		ENSMUST00000157116 (Gm23827-201) 23776903-23777047 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OR_0001ENSDARG00000012141ENSDART00000015154ENSDART00000124089ENSDART00000142640ENSDARG00000055276ENSDART00000077612CIL_0004OR_0002ENSMUSG00000020273ENSMUST00000020513ENSMUST00000102863ENSMUST00000145013ENSMUST00000150711ENSMUSG00000020275ENSMUST00000102864ENSMUSG00000087741ENSMUST00000157116
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OR_0001ENSDARG00000012141ENSDART00000015154ENSDART00000124089ENSDARG00000055276ENSDART00000077612CIL_0004OR_0002ENSMUSG00000020273ENSMUST00000020513ENSMUST00000102863ENSMUST00000145013ENSMUST00000150711ENSMUSG00000020275ENSMUST00000102864ENSMUSG00000087741ENSMUST00000157116
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012141 ENSDART00000015154 N/A N/A N/A 9.025±4.13 N/A N/A 9.411±4.70 12.007±0.00 2.249±0.00 N/A 8.473±0.00 N/A N/A N/A
ENSDART00000124089 N/A N/A N/A 5.167±3.01 N/A N/A 15.117±3.37 32.209±11.93 N/A N/A N/A N/A N/A N/A
ENSDART00000142640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055276 ENSDART00000077612 N/A N/A N/A 1.889±0.18 N/A N/A 2.943±1.08 9.322±0.50 0.255±0.00 N/A 2.064±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020273 ENSMUST00000020513 1.467±0.47 N/A 3.102±0.32 7.379±1.12 2.068±0.28 1.591±0.45 1.368±0.48 1.406±0.36 1.791±0.60 2.563±0.57 0.961±0.22 3.582±0.62 2.634±0.30 2.740±1.01
ENSMUST00000102863 N/A N/A N/A 1.464±0.00 N/A N/A N/A N/A N/A N/A N/A 2.759±0.00 1.181±0.30 3.211±0.00
ENSMUST00000145013 N/A 0.305±0.00 N/A N/A 1.266±0.04 0.790±0.10 N/A 0.824±0.29 0.370±0.05 0.819±0.00 N/A 1.227±0.49 N/A N/A
ENSMUST00000150711 N/A N/A N/A N/A 1.442±0.70 N/A 0.694±0.03 0.903±0.11 0.423±0.00 1.487±0.13 N/A N/A N/A N/A
ENSMUSG00000020275 ENSMUST00000102864 N/A 1.655±0.27 N/A 0.362±0.00 3.087±0.00 1.447±0.37 N/A 0.493±0.09 1.102±0.51 1.305±0.10 0.330±0.12 2.772±0.60 0.551±0.14 0.375±0.21
ENSMUSG00000087741 ENSMUST00000157116 N/A N/A N/A N/A N/A N/A N/A N/A 2.249±0.00 N/A N/A N/A N/A N/A

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