C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) polymerase gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150711 Papolg-004 ENSMUSG00000020273 10090 - 11:23866411-23891904 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungENSMUST00000150711
Transcript ID Breast Heart Kidney Liver Lung
ENSMUST00000150711 1.442±0.70 0.694±0.03 0.903±0.11 0.423±0.00 1.487±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PG CIL_0008PG_0002 VISTA 11:23715166-24317101
CIL_0004OR CIL_0004OR_0002 CGP 11:23741514-23895253
CIL_0009DA CIL_0009DA_0002 VISTA 11:23762086-24363576
CIL_0008GM CIL_0008GM_0002 VISTA 11:23795054-24396665

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238714 PAPOLG-001 protein_coding Homo_sapiens 0 1044
ENST00000412217 PAPOLG-005 protein_coding Homo_sapiens 0 562
ENST00000414060 PAPOLG-003 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000453839 PAPOLG-004 nonsense_mediated_decay Homo_sapiens 0 2451
ENST00000470208 PAPOLG-007 retained_intron Homo_sapiens 0 337
ENST00000483370 PAPOLG-008 processed_transcript Homo_sapiens 0 673
ENST00000496283 PAPOLG-002 retained_intron Homo_sapiens 0 1775

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