C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059390-ENSDARG00000086768 CGP 7955 18:4695727-4735630
GeneTranscriptPositionBiotype
ENSDARG00000059390 (slc12a1)
solute carrier family 12, member 1 		ENSDART00000027839 (slc12a1-001) 4695727-4722640 protein_coding
ENSDART00000133597 (slc12a1-002) 4725739-4727527 protein_coding
ENSDARG00000086768 (dut)
dUTP pyrophosphatase 		ENSDART00000122000 (dut-001) 4729279-4735630 protein_coding
ENSDART00000131941 (dut-005) 4731547-4735579 protein_coding
ENSDART00000132694 (dut-004) 4730699-4732922 protein_coding
ENSDART00000133436 (dut-003) 4730628-4735624 protein_coding
ENSDART00000145723 (dut-002) 4729030-4735626 protein_coding
CIL_0004QD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000074803-ENSG00000128951 CGP 9606 15:48191664-48343373
GeneTranscriptPositionBiotype
ENSG00000074803 (SLC12A1)
solute carrier family 12 (sodium/potassium/chloride transporter), member 1 		ENST00000330289 (SLC12A1-002) 48207534-48237349 protein_coding
ENST00000380993 (SLC12A1-201) 48206301-48304076 protein_coding
ENST00000396577 (SLC12A1-001) 48206302-48304078 protein_coding
ENST00000558252 (SLC12A1-007) 48222328-48304076 retained_intron
ENST00000558405 (SLC12A1-006) 48207706-48302997 protein_coding
ENST00000558805 (SLC12A1-012) 48232725-48235344 protein_coding
ENST00000559641 (SLC12A1-005) 48191765-48285127 protein_coding
ENST00000559723 (SLC12A1-010) 48225851-48234925 processed_transcript
ENST00000560692 (SLC12A1-008) 48224326-48304078 retained_intron
ENST00000561031 (SLC12A1-011) 48207720-48221445 protein_coding
ENST00000561127 (SLC12A1-009) 48191664-48230430 protein_coding
ENSG00000128951 (DUT)
deoxyuridine triphosphatase 		ENST00000331200 (DUT-001) 48331423-48343373 protein_coding
ENST00000455976 (DUT-003) 48332103-48343369 protein_coding
ENST00000558367 (DUT-010) 48332406-48342033 protein_coding
ENST00000558472 (DUT-009) 48331456-48342052 protein_coding
ENST00000558813 (DUT-006) 48331405-48342293 protein_coding
ENST00000558978 (DUT-002) 48331473-48342395 nonsense_mediated_decay
ENST00000559416 (DUT-008) 48331095-48342137 protein_coding
ENST00000559540 (DUT-004) 48332210-48342395 protein_coding
ENST00000559852 (DUT-011) 48341136-48342062 retained_intron
ENST00000559935 (DUT-007) 48331011-48341495 protein_coding
ENST00000561350 (DUT-012) 48334445-48340236 processed_transcript
ENSG00000202542 (Y_RNA)
Y RNA 		ENST00000365672 (Y_RNA.1-584) 48325558-48325671 misc_RNA
ENSG00000233932 (CTXN2)
cortexin 2 		ENST00000417307 (CTXN2-001) 48191539-48203756 protein_coding
ENSG00000259385 (RP11-605F22.1)
 ENST00000559875 (RP11-605F22.1-001) 48192191-48201684 antisense
CIL_0004QD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027202-ENSMUSG00000027203 CGP 10090 2:125152505-125258608
GeneTranscriptPositionBiotype
ENSMUSG00000027202 (Slc12a1)
solute carrier family 12, member 1 		ENSMUST00000028630 (Slc12a1-002) 125152600-125230002 protein_coding
ENSMUST00000110494 (Slc12a1-001) 125152505-125230002 protein_coding
ENSMUST00000110495 (Slc12a1-003) 125152600-125229999 protein_coding
ENSMUST00000147095 (Slc12a1-004) 125152580-125167145 retained_intron
ENSMUSG00000027203 (Dut)
deoxyuridine triphosphatase 		ENSMUST00000051605 (Dut-002) 125247482-125258608 protein_coding
ENSMUST00000082122 (Dut-001) 125247190-125257748 protein_coding
ENSMUST00000133211 (Dut-003) 125247900-125249028 processed_transcript
ENSMUSG00000086416 (Gm14002)
predicted gene 14002 		ENSMUST00000123574 (Gm14002-001) 125207529-125217512 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QD_0001ENSDARG00000059390ENSDART00000027839ENSDART00000133597ENSDARG00000086768ENSDART00000122000ENSDART00000131941ENSDART00000132694ENSDART00000133436ENSDART00000145723CIL_0004QD_0002ENSG00000074803ENST00000330289ENST00000380993ENST00000396577ENST00000558252ENST00000558405ENST00000558805ENST00000559641ENST00000559723ENST00000560692ENST00000561031ENST00000561127ENSG00000128951ENST00000331200ENST00000455976ENST00000558367ENST00000558472ENST00000558813ENST00000558978ENST00000559416ENST00000559540ENST00000559852ENST00000559935ENST00000561350ENSG00000202542ENST00000365672ENSG00000233932ENST00000417307ENSG00000259385ENST00000559875CIL_0004QD_0003ENSMUSG00000027202ENSMUST00000028630ENSMUST00000110494ENSMUST00000110495ENSMUST00000147095ENSMUSG00000027203ENSMUST00000051605ENSMUST00000082122ENSMUST00000133211ENSMUSG00000086416ENSMUST00000123574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QD_0001ENSDARG00000059390ENSDART00000027839ENSDART00000133597ENSDARG00000086768ENSDART00000122000ENSDART00000131941ENSDART00000132694ENSDART00000133436ENSDART00000145723CIL_0004QD_0002ENSG00000074803ENST00000330289ENST00000380993ENST00000396577ENST00000558252ENST00000558405ENST00000558805ENST00000560692ENST00000561031ENST00000561127ENSG00000128951ENST00000331200ENST00000455976ENST00000558472ENST00000558813ENST00000558978ENST00000559416ENSG00000202542ENST00000365672ENSG00000233932ENST00000417307ENSG00000259385ENST00000559875CIL_0004QD_0003ENSMUSG00000027202ENSMUST00000028630ENSMUST00000110494ENSMUST00000110495ENSMUST00000147095ENSMUSG00000027203ENSMUST00000051605ENSMUST00000082122ENSMUST00000133211ENSMUSG00000086416ENSMUST00000123574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059390 ENSDART00000027839 N/A N/A N/A N/A N/A N/A N/A 11.005±9.81 0.078±0.00 N/A 3.327±0.00 N/A N/A N/A
ENSDART00000133597 N/A N/A N/A 0.267±0.01 N/A N/A N/A 96.009±2.23 0.185±0.00 N/A 3.118±0.00 N/A N/A N/A
ENSDARG00000086768 ENSDART00000122000 N/A N/A N/A 4.066±2.71 N/A N/A 6.844±3.67 19.733±0.00 0.504±0.00 N/A 8.016±0.00 N/A N/A N/A
ENSDART00000131941 N/A N/A N/A 0.263±0.04 N/A N/A N/A 0.889±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000132694 N/A N/A N/A N/A N/A N/A N/A N/A 0.292±0.00 N/A N/A N/A N/A N/A
ENSDART00000133436 N/A N/A N/A 4.500±2.57 N/A N/A 3.306±0.00 N/A 0.520±0.00 N/A 2.516±0.00 N/A N/A N/A
ENSDART00000145723 N/A N/A N/A 3.530±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074803 ENST00000330289 N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A 0.025±0.00 N/A N/A
ENST00000380993 0.002±0.00 N/A N/A 0.110±0.00 N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A 0.198±0.00
ENST00000396577 N/A N/A N/A N/A N/A N/A N/A 109.060±0.00 0.010±0.00 N/A N/A N/A N/A N/A
ENST00000558252 N/A 0.002±0.00 40.152±0.00 N/A N/A 0.018±0.00 0.002±0.00 N/A N/A N/A 0.010±0.00 N/A N/A N/A
ENST00000558405 N/A N/A N/A 0.427±0.00 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A
ENST00000558805 N/A N/A N/A N/A N/A 0.328±0.00 N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A
ENST00000559641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560692 N/A N/A N/A 0.091±0.00 N/A N/A 0.009±0.00 N/A N/A N/A 0.011±0.00 0.015±0.01 0.003±0.00 N/A
ENST00000561031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENST00000561127 N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000128951 ENST00000331200 N/A N/A N/A N/A 1.896±0.00 N/A 1.300±0.69 1.571±0.77 0.907±0.41 1.644±0.49 0.411±0.00 3.542±1.02 2.852±1.46 N/A
ENST00000455976 N/A 2.686±0.00 0.541±0.00 2.465±0.79 1.352±0.29 2.435±0.00 N/A N/A 0.444±0.00 0.847±0.00 0.172±0.00 1.971±0.00 1.168±0.00 2.862±0.00
ENST00000558367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558472 10.583±0.00 N/A N/A N/A N/A N/A 8.546±0.00 N/A 5.324±0.00 13.757±0.00 1.817±0.83 98.512±80.14 58.548±60.45 134.384±0.00
ENST00000558813 8.903±0.00 11.247±0.00 N/A 7.943±0.00 9.730±0.00 9.099±0.00 N/A 7.018±0.00 N/A 6.683±0.00 1.984±0.00 27.045±1.18 18.369±4.35 15.435±0.00
ENST00000558978 9.626±0.00 10.151±0.00 2.558±0.00 6.729±0.00 11.003±0.00 11.070±0.00 5.996±0.00 9.683±0.00 2.395±0.00 4.504±0.00 2.138±0.00 N/A 2.836±0.00 9.007±0.00
ENST00000559416 N/A N/A 5.195±0.00 9.900±1.37 11.335±0.00 19.685±0.00 12.458±5.98 5.463±0.00 9.410±5.52 12.463±4.07 2.942±1.96 18.225±0.00 N/A 10.012±0.00
ENST00000559540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202542 ENST00000365672 N/A N/A N/A N/A N/A 9.378±0.00 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233932 ENST00000417307 N/A N/A N/A 0.548±0.08 N/A 0.063±0.00 N/A 0.212±0.00 N/A N/A N/A 0.007±0.00 N/A N/A
ENSG00000259385 ENST00000559875 0.021±0.00 N/A N/A 3.516±0.52 0.532±0.00 0.303±0.14 N/A N/A N/A N/A N/A 0.144±0.05 N/A 3.376±1.73
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027202 ENSMUST00000028630 N/A N/A N/A 0.024±0.02 0.003±0.00 N/A 0.001±0.00 18.751±4.41 0.001±0.00 0.017±0.00 N/A 0.023±0.01 0.014±0.01 0.147±0.09
ENSMUST00000110494 N/A N/A N/A N/A 0.039±0.00 N/A N/A 17.393±3.16 N/A N/A N/A N/A N/A N/A
ENSMUST00000110495 N/A N/A N/A 0.010±0.00 0.007±0.00 N/A 0.006±0.00 79.625±11.42 0.001±0.00 0.021±0.01 N/A 0.007±0.00 0.030±0.02 0.086±0.03
ENSMUST00000147095 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 0.020±0.00 N/A 0.020±0.00 N/A
ENSMUSG00000027203 ENSMUST00000051605 1.836±0.93 5.085±0.36 0.999±0.15 3.404±1.10 1.468±0.92 3.107±0.33 0.915±0.37 2.199±0.48 4.503±5.41 1.412±0.42 0.749±0.18 6.583±1.63 3.186±2.30 5.395±0.20
ENSMUST00000082122 7.650±2.00 35.192±12.41 9.760±2.71 25.835±8.81 13.826±5.22 9.604±3.33 11.234±0.26 10.761±2.64 39.385±39.37 10.506±3.58 4.185±1.06 32.798±12.73 48.735±45.42 26.207±28.27
ENSMUST00000133211 N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A 0.322±0.00 N/A N/A 1.537±0.45 0.461±0.19 3.036±2.34
ENSMUSG00000086416 ENSMUST00000123574 0.040±0.00 N/A 0.003±0.00 0.063±0.02 N/A N/A N/A 0.449±0.05 0.012±0.01 N/A N/A 0.049±0.03 0.030±0.02 0.011±0.00

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