C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | neurexin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000554719  |
NRXN3-001 |
ENSG00000021645 |
9606 | + |
14:78403750-79862443  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004U1 | CIL_0004U1_0001 | CGP | 14:77800083-79868290 |
| CIL_0008FT | CIL_0008FT_0001 | VISTA | 14:78139980-78740994 |
| CIL_0004U0 | CIL_0004U0_0001 | CGP | 14:78242391-80387757 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004872 | TAS | receptor activity |
| GO:0005246 | IEA | calcium channel regulator activity |
| GO:0005515 | IEA | protein binding |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0007158 | TAS | neuron cell-cell adhesion |
| GO:0007268 | IEA | synaptic transmission |
| GO:0007269 | IEA | neurotransmitter secretion |
| GO:0007411 | TAS | axon guidance |
| GO:0007416 | IEA | synapse assembly |
| GO:0007612 | IGI | learning |
| GO:0030534 | IGI | adult behavior |
| GO:0035176 | IGI | social behavior |
| GO:0046872 | IEA | metal ion binding |
| GO:0050839 | TAS | cell adhesion molecule binding |
| GO:0051965 | IEA | positive regulation of synapse assembly |
| GO:0071625 | IGI | vocalization behavior |
| GO:0090129 | IEA | positive regulation of synapse maturation |
| GO:0097109 | TAS | neuroligin family protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000190626
|
Nrxn3-012 | nonsense_mediated_decay | Mus_musculus | 0 | 4189 |
|
ENSMUST00000163134
|
Nrxn3-001 | protein_coding | Mus_musculus | 0 | 3781 |
|
ENSMUST00000057634
|
Nrxn3-002 | protein_coding | Mus_musculus | 0 | 3661 |
|
ENSMUST00000167103
|
Nrxn3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 3589 |
|
ENSMUST00000167887
|
Nrxn3-201 | protein_coding | Mus_musculus | 0 | 3121 |
|
ENSMUST00000167734
|
Nrxn3-004 | retained_intron | Mus_musculus | 0 | 1812 |
|
ENSMUST00000110133
|
Nrxn3-010 | protein_coding | Mus_musculus | 0 | 1533 |
|
ENSDART00000088179
|
nrxn3a-202 | protein_coding | Danio_rerio | 0 | 1465 |
|
ENSDART00000156928
|
nrxn3a-001 | protein_coding | Danio_rerio | 0 | 1439 |
|
ENSDART00000090934
|
nrxn3b-202 | protein_coding | Danio_rerio | 0 | 1271 |
|
ENSDART00000127050
|
nrxn3b-203 | protein_coding | Danio_rerio | 0 | 1271 |
|
ENSDART00000090646
|
nrxn3b-201 | protein_coding | Danio_rerio | 0 | 1262 |
|
ENSMUST00000077182
|
Nrxn2-201 | protein_coding | Mus_musculus | 0 | 898 |
|
ENSMUST00000113462
|
Nrxn2-001 | protein_coding | Mus_musculus | 0 | 809 |
|
ENSMUST00000137166
|
Nrxn2-013 | protein_coding | Mus_musculus | 0 | 717 |
|
ENSMUST00000110130
|
Nrxn3-006 | protein_coding | Mus_musculus | 0 | 612 |
|
ENSDART00000149694
|
nrxn3b-001 | protein_coding | Danio_rerio | 0 | 610 |
|
ENSMUST00000170533
|
Nrxn3-009 | processed_transcript | Mus_musculus | 0 | 568 |
|
ENSMUST00000150792
|
Nrxn2-005 | retained_intron | Mus_musculus | 0 | 403 |
|
ENSMUST00000113461
|
Nrxn2-008 | protein_coding | Mus_musculus | 0 | 403 |
|
ENSDART00000087657
|
nrxn2a-201 | protein_coding | Danio_rerio | 0 | 368 |
|
ENSDART00000141629
|
nrxn2a-001 | protein_coding | Danio_rerio | 0 | 368 |
|
ENSMUST00000155158
|
Nrxn2-014 | protein_coding | Mus_musculus | 0 | 344 |
|
ENSMUST00000124815
|
Nrxn2-011 | processed_transcript | Mus_musculus | 0 | 270 |
|
ENSMUST00000157014
|
Nrxn2-007 | processed_transcript | Mus_musculus | 0 | 261 |
