C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor-like protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000077125 aplp2-001 ENSDARG00000054864 7955 - 18:42781185-42943595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077125
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077125 37.509±32.84 30.452±10.89 15.780±0.48 1.599±0.00 22.219±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000511 CIL_000511_0001 CGP 18:42722094-42943595
CIL_000510 CIL_000510_0001 CGP 18:42781185-42981407

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004867 IEA serine-type endopeptidase inhibitor activity
GO:0008201 IEA heparin binding
GO:0016021 IEA integral to membrane
GO:0046914 IEA transition metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072634 Aplp2-201 protein_coding Mus_musculus 0 316
ENSMUST00000079758 Aplp2-202 protein_coding Mus_musculus 0 316
ENST00000263574 APLP2-005 protein_coding Homo_sapiens 0 545
ENST00000278756 APLP2-008 protein_coding Homo_sapiens 0 752
ENST00000338167 APLP2-001 protein_coding Homo_sapiens 0 752
ENST00000345598 APLP2-002 protein_coding Homo_sapiens 0 680
ENST00000525604 APLP2-026 retained_intron Homo_sapiens 0 300
ENST00000528499 APLP2-003 protein_coding Homo_sapiens 0 678
ENST00000533616 APLP2-009 nonsense_mediated_decay Homo_sapiens 0 473
ENST00000533860 APLP2-024 retained_intron Homo_sapiens 0 307

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