C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00053A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000006453-ENSG00000106236 CGP 9606 7:98291651-98629868
GeneTranscriptPositionBiotype
ENSG00000006453 (BAIAP2L1)
BAI1-associated protein 2-like 1 		ENST00000005260 (BAIAP2L1-001) 98291651-98401068 protein_coding
ENST00000462558 (BAIAP2L1-002) 98308304-98401068 processed_transcript
ENST00000473569 (BAIAP2L1-004) 98317237-98355426 retained_intron
ENST00000479789 (BAIAP2L1-003) 98355041-98400337 processed_transcript
ENST00000480580 (BAIAP2L1-005) 98304196-98306957 retained_intron
ENSG00000106236 (NPTX2)
neuronal pentraxin II 		ENST00000265634 (NPTX2-001) 98617297-98629868 protein_coding
ENST00000466102 (NPTX2-002) 98619667-98627253 retained_intron
ENSG00000164713 (BRI3)
brain protein I3 		ENST00000297290 (BRI3-001) 98281675-98291524 protein_coding
ENST00000456357 (BRI3-004) 98252379-98291524 processed_transcript
ENST00000473967 (BRI3-003) 98281836-98291545 processed_transcript
ENST00000474291 (BRI3-002) 98281822-98282706 retained_intron
ENST00000485422 (BRI3-007) 98306522-98310441 processed_transcript
ENST00000491463 (BRI3-006) 98282383-98307449 nonsense_mediated_decay
ENST00000539286 (BRI3-008) 98281667-98292963 protein_coding
ENSG00000213455 (AC091654.7)
 ENST00000452411 (AC091654.7-001) 98454119-98454617 processed_pseudogene
ENSG00000214389 (RPS3AP26)
ribosomal protein S3a pseudogene 26 		ENST00000398259 (RPS3AP26-001) 98385801-98386584 processed_pseudogene
ENSG00000223402 (AC074121.4)
 ENST00000441836 (AC074121.4-001) 98478551-98479225 processed_pseudogene
ENSG00000272950 (RP11-307C18.1)
 ENST00000610062 (RP11-307C18.1-001) 98322853-98323430 antisense
CIL_00053A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038859-ENSMUSG00000059991 CGP 10090 5:144264526-144557478
GeneTranscriptPositionBiotype
ENSMUSG00000038859 (Baiap2l1)
BAI1-associated protein 2-like 1 		ENSMUST00000055190 (Baiap2l1-001) 144264526-144358112 protein_coding
ENSMUST00000129287 (Baiap2l1-003) 144281990-144288907 processed_transcript
ENSMUSG00000047843 (Bri3)
brain protein I3 		ENSMUST00000056578 (Bri3-001) 144255234-144264574 protein_coding
ENSMUST00000110695 (Bri3-003) 144244437-144264395 protein_coding
ENSMUST00000155491 (Bri3-002) 144255225-144446757 nonsense_mediated_decay
ENSMUSG00000059991 (Nptx2)
neuronal pentraxin 2 		ENSMUST00000071782 (Nptx2-201) 144545887-144557478 protein_coding
ENSMUSG00000086894 (Gm15708)
predicted gene 15708 		ENSMUST00000156467 (Gm15708-001) 144277061-144280513 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053A_0001ENSG00000006453ENST00000005260ENST00000462558ENST00000473569ENST00000479789ENST00000480580ENSG00000106236ENST00000265634ENST00000466102ENSG00000164713ENST00000297290ENST00000456357ENST00000473967ENST00000474291ENST00000485422ENST00000491463ENST00000539286ENSG00000213455ENST00000452411ENSG00000214389ENST00000398259ENSG00000223402ENST00000441836ENSG00000272950ENST00000610062CIL_00053A_0002ENSMUSG00000038859ENSMUST00000055190ENSMUST00000129287ENSMUSG00000047843ENSMUST00000056578ENSMUST00000110695ENSMUST00000155491ENSMUSG00000059991ENSMUST00000071782ENSMUSG00000086894ENSMUST00000156467
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053A_0001ENSG00000006453ENST00000005260ENST00000462558ENSG00000106236ENST00000265634ENSG00000164713ENST00000297290ENST00000456357ENST00000485422ENSG00000213455ENST00000452411ENSG00000214389ENST00000398259ENSG00000223402ENST00000441836ENSG00000272950ENST00000610062CIL_00053A_0002ENSMUSG00000038859ENSMUST00000055190ENSMUSG00000047843ENSMUST00000056578ENSMUST00000110695ENSMUSG00000059991ENSMUST00000071782ENSMUSG00000086894ENSMUST00000156467
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006453 ENST00000005260 3.422±0.00 N/A N/A 0.211±0.00 2.760±0.00 3.720±0.48 N/A 3.175±1.66 2.354±1.82 5.909±3.83 0.218±0.00 13.464±14.48 8.534±1.67 5.682±0.55
ENST00000462558 N/A N/A 1.705±0.00 N/A 3.399±0.00 N/A N/A 5.136±0.00 N/A N/A N/A 2.130±0.00 N/A 7.851±0.00
ENST00000473569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000106236 ENST00000265634 15.437±0.00 1.177±0.00 N/A 13.042±3.14 0.238±0.02 4.741±4.48 2.141±2.01 0.811±0.00 0.287±0.11 0.197±0.09 1.282±1.25 11.077±16.25 0.345±0.16 49.687±22.75
ENST00000466102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164713 ENST00000297290 109.332±0.00 73.783±0.00 5.293±0.00 12.912±6.07 91.678±0.00 78.998±0.00 56.078±51.85 49.433±28.61 63.488±56.07 93.869±83.82 217.028±207.65 197.323±205.50 284.251±135.83 140.298±52.52
ENST00000456357 N/A N/A N/A 9.331±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 61.964±6.76 N/A
ENST00000473967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485422 N/A 5.524±0.00 N/A 1.138±0.00 N/A N/A N/A N/A N/A N/A 0.485±0.00 N/A N/A N/A
ENST00000491463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213455 ENST00000452411 N/A 0.227±0.00 N/A 0.069±0.00 0.099±0.00 0.030±0.00 0.029±0.00 0.098±0.00 N/A N/A 0.168±0.00 N/A N/A 0.030±0.00
ENSG00000214389 ENST00000398259 0.144±0.00 0.202±0.00 N/A 0.115±0.00 0.529±0.28 0.343±0.11 0.045±0.02 0.242±0.08 1.156±0.00 N/A 0.089±0.00 0.514±0.27 0.184±0.14 0.072±0.05
ENSG00000223402 ENST00000441836 N/A 0.054±0.00 N/A 0.117±0.00 N/A 0.103±0.00 N/A N/A N/A 0.155±0.00 0.048±0.00 0.250±0.00 N/A 0.049±0.00
ENSG00000272950 ENST00000610062 0.176±0.00 0.530±0.00 0.715±0.00 1.129±0.00 0.720±0.11 0.687±0.64 0.338±0.00 0.332±0.00 0.043±0.00 1.843±0.00 5.003±0.00 0.398±0.37 0.555±0.16 0.474±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038859 ENSMUST00000055190 2.536±0.02 N/A 3.820±0.04 N/A 1.375±0.00 50.009±5.52 3.524±0.64 6.573±0.71 5.555±2.67 14.981±1.91 N/A 6.649±1.17 7.905±3.64 N/A
ENSMUST00000129287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047843 ENSMUST00000056578 15.042±1.65 84.125±31.46 20.415±1.14 16.763±2.13 25.638±4.95 53.859±3.04 29.240±13.14 36.540±6.39 14.492±8.44 31.164±10.09 9.763±1.48 43.883±5.03 12.930±1.05 N/A
ENSMUST00000110695 41.114±6.54 N/A 58.887±4.72 58.937±34.82 28.399±7.46 N/A 69.685±4.04 62.179±9.18 14.456±3.93 59.875±1.51 15.105±1.49 76.796±65.06 72.821±58.99 105.473±14.95
ENSMUST00000155491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000059991 ENSMUST00000071782 4.586±3.38 0.176±0.08 7.097±0.68 10.485±6.47 0.670±0.18 1.049±0.17 0.090±0.07 0.114±0.03 0.018±0.01 0.676±0.03 0.036±0.02 3.229±1.58 0.762±0.25 4.681±1.81
ENSMUSG00000086894 ENSMUST00000156467 N/A N/A N/A N/A 4.260±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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