C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00057L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030297-ENSDARG00000070213 CGP 7955 11:38969549-39046271
GeneTranscriptPositionBiotype
ENSDARG00000030297 (AL929022.1)
Uncharacterized protein 		ENSDART00000019047 (AL929022.1-201) 38969549-38994099 protein_coding
ENSDARG00000070213 (etnk2)
ethanolamine kinase 2 		ENSDART00000102868 (etnk2-201) 39014482-39046271 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00057L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143842-ENSG00000143845 CGP 9606 1:204073115-204152003
GeneTranscriptPositionBiotype
ENSG00000143842 (SOX13)
SRY (sex determining region Y)-box 13 		ENST00000272193 (SOX13-004) 204116065-204126152 processed_transcript
ENST00000367203 (SOX13-001) 204073115-204119859 processed_transcript
ENST00000367204 (SOX13-002) 204073604-204127743 protein_coding
ENST00000480326 (SOX13-003) 204116507-204122917 nonsense_mediated_decay
ENST00000525258 (SOX13-009) 204122386-204123729 retained_intron
ENST00000525442 (SOX13-007) 204074026-204113088 protein_coding
ENST00000528591 (SOX13-008) 204078129-204116627 protein_coding
ENST00000530882 (SOX13-006) 204073156-204117158 processed_transcript
ENST00000534185 (SOX13-005) 204073153-204114570 processed_transcript
ENST00000618875 (SOX13-201) 204112916-204127741 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057L_0001ENSDARG00000030297ENSDART00000019047ENSDARG00000070213ENSDART00000102868CIL_00057L_0002ENSG00000143842ENST00000272193ENST00000367203ENST00000367204ENST00000480326ENST00000525258ENST00000525442ENST00000528591ENST00000530882ENST00000534185ENST00000618875
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057L_0001ENSDARG00000030297ENSDART00000019047ENSDARG00000070213ENSDART00000102868CIL_00057L_0002ENSG00000143842ENST00000272193ENST00000367203ENST00000367204ENST00000528591ENST00000618875
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030297 ENSDART00000019047 N/A N/A N/A 2.117±0.00 N/A N/A 0.702±0.00 0.681±0.00 0.221±0.00 N/A 1.246±0.00 N/A N/A N/A
ENSDARG00000070213 ENSDART00000102868 N/A N/A N/A 2.291±0.00 N/A N/A 0.214±0.18 0.744±0.44 0.279±0.00 N/A 0.313±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143842 ENST00000272193 N/A N/A N/A N/A N/A N/A N/A 0.791±0.00 N/A N/A 0.499±0.00 N/A N/A 1.773±0.00
ENST00000367203 N/A N/A 0.665±0.00 0.798±0.00 N/A 0.236±0.00 0.051±0.00 N/A 0.437±0.00 0.453±0.00 N/A 0.932±0.00 N/A N/A
ENST00000367204 8.499±0.00 7.616±0.00 N/A 1.994±1.74 2.088±1.65 4.690±3.48 N/A 6.372±0.00 3.407±1.68 5.310±0.00 3.396±0.00 8.798±0.00 8.128±1.03 5.771±0.00
ENST00000480326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528591 N/A N/A N/A N/A N/A N/A 0.877±0.00 1.452±0.00 N/A N/A 1.324±0.00 N/A N/A N/A
ENST00000530882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618875 4.438±0.00 1.836±0.00 N/A 0.396±0.00 4.754±0.00 N/A 3.907±0.00 7.816±0.00 N/A 7.714±6.43 1.195±1.08 10.818±3.26 18.365±8.05 1.106±0.00

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