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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SRY (sex determining region Y)-box 13 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000525258  |
SOX13-009 |
ENSG00000143842 |
9606 | + |
1:204122386-204123729  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W2 | CIL_0008W2_0001 | VISTA | 1:203635137-204239984 |
| CIL_0000TU | CIL_0000TU_0002 | CGP | 1:203861603-204127743 |
| CIL_00057L | CIL_00057L_0002 | CGP | 1:204073115-204152003 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000126530
|
Sox13-003 | retained_intron | Mus_musculus | 0 | 385 |
|
ENSMUST00000094551
|
Sox13-201 | protein_coding | Mus_musculus | 0 | 374 |
|
ENSMUST00000153799
|
Sox13-002 | protein_coding | Mus_musculus | 0 | 374 |
|
ENSMUST00000144386
|
Sox13-001 | protein_coding | Mus_musculus | 0 | 374 |
|
ENSMUST00000040019
|
Sox10-201 | protein_coding | Mus_musculus | 0.000001 | 58 |
|
ENSMUST00000099151
|
Sox2-001 | protein_coding | Mus_musculus | 0.00005 | 53 |
