C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY (sex determining region Y)-box 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367203 SOX13-001 ENSG00000143842 9606 + 1:204073115-204119859 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverLungOvaryENST00000367203
Transcript ID Bladder Brain Colon Heart Liver Lung Ovary
ENST00000367203 0.665±0.00 0.798±0.00 0.236±0.00 0.051±0.00 0.437±0.00 0.453±0.00 0.932±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W2 CIL_0008W2_0001 VISTA 1:203635137-204239984
CIL_0000TU CIL_0000TU_0002 CGP 1:203861603-204127743
CIL_00057L CIL_00057L_0002 CGP 1:204073115-204152003

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153799 Sox13-002 protein_coding Mus_musculus 0 880
ENSMUST00000094551 Sox13-201 protein_coding Mus_musculus 0 769
ENSMUST00000144386 Sox13-001 protein_coding Mus_musculus 0 715
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00006 55

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